Information for 18-CCTGCCATTATTT (Motif 30)

A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T
Reverse Opposite:
G T C A C G T A G T C A A C G T C G T A C G T A A C G T A C T G A C T G A G T C C T G A C T A G A C T G
p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.2 +/- 14.4bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCTGCCATTATTT
GTCCGCCATTA---
 A C G T A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCTGCCATTATTT
---GCAATTAG--
 A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCTGCCATTATTT
---BCMATTAG--
 A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCTGCCATTATTT--
ACCGGCAATTAATAAA
 A C G T A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCTGCCATTATTT
-CTGCCCGCA---
 A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCTGCCATTATTT-
----CCATTGTTYB
 A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCTGCCATTATTT
---NCCATTGTTY
 A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

BSX/MA0876.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCTGCCATTATTT
---CCAATTAA--
 A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCTGCCATTATTT
----CCATTGTTC
 A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCTGCCATTATTT
----YCATTAMC-
 A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T