Information for 15-BCACTGAGACTCAGTG (Motif 26)

A G C T T A G C C G T A A T G C A G C T A T C G C G T A A C T G C G T A A T G C C G A T A T G C C G T A T A C G C G A T A C T G
Reverse Opposite:
G T A C C G T A A G T C C G A T T A C G C G T A A T C G C G A T A G T C C G A T A T G C C T G A A T C G C G A T A T C G T C G A
p-value:1e-8
log p-value:-2.014e+01
Information Content per bp:1.757
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.7 +/- 33.4bp
Average Position of motif in Background59.4 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-BCACTGAGACTCAGTG
NNNACCGAGAGTNNN--
 A C G T A G C T T A G C C G T A A T G C A G C T A T C G C G T A A C T G C G T A A T G C C G A T A T G C C G T A T A C G C G A T A C T G
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:BCACTGAGACTCAGTG
---NTGATTGACAGN-
 A G C T T A G C C G T A A T G C A G C T A T C G C G T A A C T G C G T A A T G C C G A T A T G C C G T A T A C G C G A T A C T G
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:BCACTGAGACTCAGTG
---BTGABTGACAGS-
 A G C T T A G C C G T A A T G C A G C T A T C G C G T A A C T G C G T A A T G C C G A T A T G C C G T A T A C G C G A T A C T G
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-BCACTGAGACTCAGTG
GNNACCGAGAATNNN--
 A C G T A G C T T A G C C G T A A T G C A G C T A T C G C G T A A C T G C G T A A T G C C G A T A T G C C G T A T A C G C G A T A C T G
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:BCACTGAGACTCAGTG
----TGAGTGACAGSC
 A G C T T A G C C G T A A T G C A G C T A T C G C G T A A C T G C G T A A T G C C G A T A T G C C G T A T A C G C G A T A C T G
A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-BCACTGAGACTCAGTG
TTGACCGAGAATTCC--
 A C G T A G C T T A G C C G T A A T G C A G C T A T C G C G T A A C T G C G T A A T G C C G A T A T G C C G T A T A C G C G A T A C T G
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:5
Orientation:forward strand
Alignment:BCACTGAGACTCAGTG
-----GAGSCCGAGC-
 A G C T T A G C C G T A A T G C A G C T A T C G C G T A A C T G C G T A A T G C C G A T A T G C C G T A T A C G C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.50
Offset:9
Orientation:forward strand
Alignment:BCACTGAGACTCAGTG---
---------TTRAGTGSYK
 A G C T T A G C C G T A A T G C A G C T A T C G C G T A A C T G C G T A A T G C C G A T A T G C C G T A T A C G C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:BCACTGAGACTCAGTG---
---------TTGAGTGSTT
 A G C T T A G C C G T A A T G C A G C T A T C G C G T A A C T G C G T A A T G C C G A T A T G C C G T A T A C G C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.48
Offset:9
Orientation:reverse strand
Alignment:BCACTGAGACTCAGTG---
---------TTAAGTGCTT
 A G C T T A G C C G T A A T G C A G C T A T C G C G T A A C T G C G T A A T G C C G A T A T G C C G T A T A C G C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T