Information for 11-TTTCCTTGGCTCA (Motif 21)

G A C T A C G T A G C T A G T C G T A C A C G T C A G T C T A G C T A G A G T C A C G T A T G C T G C A
Reverse Opposite:
A C G T A T C G G T C A C T A G A G T C A G T C G C T A C G T A A C T G T C A G C T G A T C G A C T G A
p-value:1e-9
log p-value:-2.133e+01
Information Content per bp:1.729
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif62.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets50.4 +/- 30.7bp
Average Position of motif in Background57.9 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTTCCTTGGCTCA-
--TGATTGGCTANN
 G A C T A C G T A G C T A G T C G T A C A C G T C A G T C T A G C T A G A G T C A C G T A T G C T G C A A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PH0057.1_Hoxb13/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTCCTTGGCTCA
NNAATTTTATTGGNTN-
 A C G T A C G T A C G T A C G T G A C T A C G T A G C T A G T C G T A C A C G T C A G T C T A G C T A G A G T C A C G T A T G C T G C A
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTTCCTTGGCTCA
NTTTTATTGG----
 A C G T G A C T A C G T A G C T A G T C G T A C A C G T C A G T C T A G C T A G A G T C A C G T A T G C T G C A
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TTTCCTTGGCTCA
----NTTGGCANN
 G A C T A C G T A G C T A G T C G T A C A C G T C A G T C T A G C T A G A G T C A C G T A T G C T G C A
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TTTCCTTGGCTCA
-----TTGGCA--
 G A C T A C G T A G C T A G T C G T A C A C G T C A G T C T A G C T A G A G T C A C G T A T G C T G C A
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TTTCCTTGGCTCA
NNTGTTTATTTTGGCA--
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T A G C T A G T C G T A C A C G T C A G T C T A G C T A G A G T C A C G T A T G C T G C A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTTCCTTGGCTCA
-CCGATTGGCT--
 G A C T A C G T A G C T A G T C G T A C A C G T C A G T C T A G C T A G A G T C A C G T A T G C T G C A
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTCCTTGGCTCA
NTTTTATTGG----
 A C G T G A C T A C G T A G C T A G T C G T A C A C G T C A G T C T A G C T A G A G T C A C G T A T G C T G C A
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTCCTTGGCTCA
TTTTTATTGG----
 A C G T G A C T A C G T A G C T A G T C G T A C A C G T C A G T C T A G C T A G A G T C A C G T A T G C T G C A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTTCCTTGGCTCA
NNANTTTTATTGGNNN-
 A C G T A C G T A C G T A C G T G A C T A C G T A G C T A G T C G T A C A C G T C A G T C T A G C T A G A G T C A C G T A T G C T G C A
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T