Information for 2-GTTGTAGTTGGAA (Motif 2)

A C T G A C G T A C G T A C T G C G A T C G T A T A C G A C G T A C G T A C T G A C T G C G T A C T G A
Reverse Opposite:
A G C T C G A T G T A C A G T C C G T A G T C A A T G C A C G T C G T A A G T C C G T A C G T A A G T C
p-value:1e-13
log p-value:-3.157e+01
Information Content per bp:1.836
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.3 +/- 23.4bp
Average Position of motif in Background73.0 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTTGTAGTTGGAA
NNNTGTTGTTGTTNG--
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G A T C G T A T A C G A C G T A C G T A C T G A C T G C G T A C T G A
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTTGTAGTTGGAA
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G A T C G T A T A C G A C G T A C G T A C T G A C T G C G T A C T G A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTTGTAGTTGGAA
NNTGTGGTTT---
 A C T G A C G T A C G T A C T G C G A T C G T A T A C G A C G T A C G T A C T G A C T G C G T A C T G A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GTTGTAGTTGGAA---
NNTTTTACATGTANNNT
 A C G T A C T G A C G T A C G T A C T G C G A T C G T A T A C G A C G T A C G T A C T G A C T G C G T A C T G A A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GTTGTAGTTGGAA---
ANTATTACATGTANNNN
 A C G T A C T G A C G T A C G T A C T G C G A T C G T A T A C G A C G T A C G T A C T G A C T G C G T A C T G A A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GTTGTAGTTGGAA
-----AGGTGTCA
 A C T G A C G T A C G T A C T G C G A T C G T A T A C G A C G T A C G T A C T G A C T G C G T A C T G A
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GTTGTAGTTGGAA
BNTGDCCTTG---
 A C T G A C G T A C G T A C T G C G A T C G T A T A C G A C G T A C G T A C T G A C T G C G T A C T G A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GTTGTAGTTGGAA------
TGTCATTACACGTGGAAGGCGGT
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G A T C G T A T A C G A C G T A C G T A C T G A C T G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T A G G A C T A T G C C T A G G A C T C A G T T G C A G T A C C T G A A G T C T C A G G A C T A C T G A C T G G T C A C T G A C T A G A T C G G T A C C T A G C T A G G C A T

TBX4/MA0806.1/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GTTGTAGTTGGAA
-----AGGTGTGA
 A C T G A C G T A C G T A C T G C G A T C G T A T A C G A C G T A C G T A C T G A C T G C G T A C T G A
A C G T A C G T A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----GTTGTAGTTGGAA
CTAAGGTTCTAGATCAC-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G A T C G T A T A C G A C G T A C G T A C T G A C T G C G T A C T G A
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C A C G T