Information for 10-KGCATGAGMAASAATG (Motif 18)

A C G T A C T G A T G C C T G A A C G T A T C G C G T A C A T G T G A C C G T A C T G A T A C G C G T A C T G A C G A T A C T G
Reverse Opposite:
G T A C G C T A A G C T A C G T A T G C A G C T A C G T A C T G G T A C A C G T A T G C T G C A G A C T T A C G A G T C G T C A
p-value:1e-9
log p-value:-2.215e+01
Information Content per bp:1.760
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.4 +/- 31.8bp
Average Position of motif in Background45.3 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0070.1_Sox30_1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:KGCATGAGMAASAATG-----
-----AATGAACAATGGAATT
 A C G T A C T G A T G C C T G A A C G T A T C G C G T A C A T G T G A C C G T A C T G A T A C G C G T A C T G A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.59
Offset:9
Orientation:reverse strand
Alignment:KGCATGAGMAASAATG
---------AACAAT-
 A C G T A C T G A T G C C T G A A C G T A T C G C G T A C A T G T G A C C G T A C T G A T A C G C G T A C T G A C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:KGCATGAGMAASAATG
--------NAACAAT-
 A C G T A C T G A T G C C T G A A C G T A T C G C G T A C A T G T G A C C G T A C T G A T A C G C G T A C T G A C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:KGCATGAGMAASAATG-
-------RNAACAATGG
 A C G T A C T G A T G C C T G A A C G T A T C G C G T A C A T G T G A C C G T A C T G A T A C G C G T A C T G A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:KGCATGAGMAASAATG-
-------VRAACAATGG
 A C G T A C T G A T G C C T G A A C G T A T C G C G T A C A T G T G A C C G T A C T G A T A C G C G T A C T G A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.57
Offset:8
Orientation:forward strand
Alignment:KGCATGAGMAASAATG--
--------RAACAATGGN
 A C G T A C T G A T G C C T G A A C G T A T C G C G T A C A T G T G A C C G T A C T G A T A C G C G T A C T G A C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:KGCATGAGMAASAATG--------
--AATAAAGAACAATAGAATTTCA
 A C G T A C T G A T G C C T G A A C G T A T C G C G T A C A T G T G A C C G T A C T G A T A C G C G T A C T G A C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:KGCATGAGMAASAATG-
-------VRRACAAWGG
 A C G T A C T G A T G C C T G A A C G T A T C G C G T A C A T G T G A C C G T A C T G A T A C G C G T A C T G A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:KGCATGAGMAASAATG-
--------GAACAATGG
 A C G T A C T G A T G C C T G A A C G T A T C G C G T A C A T G T G A C C G T A C T G A T A C G C G T A C T G A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:KGCATGAGMAASAATG-
-------AAAACAATGG
 A C G T A C T G A T G C C T G A A C G T A T C G C G T A C A T G T G A C C G T A C T G A T A C G C G T A C T G A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G