Information for 7-TGCTGTCATTCTTAAT (Motif 12)

A C G T A C T G A G T C C G A T A C T G A G C T A G T C C G T A A C G T A C G T T A G C A G C T A G C T C G T A C G T A C G A T
Reverse Opposite:
C G T A A C G T A C G T C T G A C T G A A T C G C G T A G T C A C G A T C T A G C T G A G T A C C G T A C T A G G T A C C G T A
p-value:1e-10
log p-value:-2.500e+01
Information Content per bp:1.776
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.7 +/- 21.0bp
Average Position of motif in Background61.7 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGCTGTCATTCTTAAT
NNNCAGCTGTCAATATN---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T A C T G A G C T A G T C C G T A A C G T A C G T T A G C A G C T A G C T C G T A C G T A C G A T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGCTGTCATTCTTAAT-
--CTTTCANTATGACTV
 A C G T A C T G A G T C C G A T A C T G A G C T A G T C C G T A A C G T A C G T T A G C A G C T A G C T C G T A C G T A C G A T A C G T
A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGCTGTCATTCTTAAT
--NTGTCAN-------
 A C G T A C T G A G T C C G A T A C T G A G C T A G T C C G T A A C G T A C G T T A G C A G C T A G C T C G T A C G T A C G A T
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGCTGTCATTCTTAAT
AAGATGATGTCAT-------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T A C T G A G C T A G T C C G T A A C G T A C G T T A G C A G C T A G C T C G T A C G T A C G A T
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGCTGTCATTCTTAAT
-NCTGTCAATCAN---
 A C G T A C T G A G T C C G A T A C T G A G C T A G T C C G T A A C G T A C G T T A G C A G C T A G C T C G T A C G T A C G A T
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGCTGTCATTCTTAAT
-GCTGTCAA-------
 A C G T A C T G A G T C C G A T A C T G A G C T A G T C C G T A A C G T A C G T T A G C A G C T A G C T C G T A C G T A C G A T
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGCTGTCATTCTTAAT
-CCTGTCAA-------
 A C G T A C T G A G T C C G A T A C T G A G C T A G T C C G T A A C G T A C G T T A G C A G C T A G C T C G T A C G T A C G A T
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGCTGTCATTCTTAAT--
NAGTTTCABTHTGACTNW
 A C G T A C T G A G T C C G A T A C T G A G C T A G T C C G T A A C G T A C G T T A G C A G C T A G C T C G T A C G T A C G A T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

PB0172.1_Sox1_2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TGCTGTCATTCTTAAT-
--CTATAATTGTTAGCG
 A C G T A C T G A G T C C G A T A C T G A G C T A G T C C G T A A C G T A C G T T A G C A G C T A G C T C G T A C G T A C G A T A C G T
A C G T A C G T G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGCTGTCATTCTTAAT
TGCTGTGATTT-----
 A C G T A C T G A G T C C G A T A C T G A G C T A G T C C G T A A C G T A C G T T A G C A G C T A G C T C G T A C G T A C G A T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T