p-value: | 1e-7 |
log p-value: | -1.775e+01 |
Information Content per bp: | 1.847 |
Number of Target Sequences with motif | 14.0 |
Percentage of Target Sequences with motif | 1.62% |
Number of Background Sequences with motif | 109.3 |
Percentage of Background Sequences with motif | 0.23% |
Average Position of motif in Targets | 59.2 +/- 19.0bp |
Average Position of motif in Background | 51.7 +/- 29.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.8 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
GCM1/MA0646.1/Jaspar
Match Rank: | 1 |
Score: | 0.80 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TACCAGCATG GTACCCGCATN |
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GCM2/MA0767.1/Jaspar
Match Rank: | 2 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TACCAGCATG TACCCGCATN |
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PB0024.1_Gcm1_1/Jaspar
Match Rank: | 3 |
Score: | 0.73 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TACCAGCATG--- TCGTACCCGCATCATT |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 4 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TACCAGCATG DCTCAGCAGG |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 5 |
Score: | 0.70 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TACCAGCATG--- CCACACAGCAGGAGA |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TACCAGCATG--- CCACACAGCAGGAGA |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TACCAGCATG--- GAGCACAGCAGGACA |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TACCAGCATG--- -CACAGCAGGGGG |
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SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer
Match Rank: | 9 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TACCAGCATG- -ANCAGGATGT |
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ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer
Match Rank: | 10 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TACCAGCATG-- ATTTCCCAGVAKSCY |
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