Information for 1-TTAGCTTGGT (Motif 9)

A C G T A C G T C G T A A T C G A T G C C G A T A C G T A C T G A C T G G A C T
Reverse Opposite:
C T G A G T A C A G T C C G T A C G T A A T C G A T G C C G A T C G T A C G T A
p-value:1e-11
log p-value:-2.592e+01
Information Content per bp:1.863
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif30.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets51.9 +/- 27.4bp
Average Position of motif in Background57.0 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTAGCTTGGT
-AAGCTTG--
 A C G T A C G T C G T A A T C G A T G C C G A T A C G T A C T G A C T G G A C T
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTAGCTTGGT
BTVATTWGCATA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A T G C C G A T A C G T A C T G A C T G G A C T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TTAGCTTGGT-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A T G C C G A T A C G T A C T G A C T G G A C T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TTAGCTTGGT-
-----TTGGCA
 A C G T A C G T C G T A A T C G A T G C C G A T A C G T A C T G A C T G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTAGCTTGGT
TGACCTTGAV
 A C G T A C G T C G T A A T C G A T G C C G A T A C G T A C T G A C T G G A C T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTAGCTTGGT--
TTTGATTGATGN
 A C G T A C G T C G T A A T C G A T G C C G A T A C G T A C T G A C T G G A C T A C G T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTAGCTTGGT
TCTTATCT----
 A C G T A C G T A C G T A C G T C G T A A T C G A T G C C G A T A C G T A C T G A C T G G A C T
A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTAGCTTGGT
CTCATTTGCATW--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A T G C C G A T A C G T A C T G A C T G G A C T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGCTTGGT--
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A T G C C G A T A C G T A C T G A C T G G A C T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTAGCTTGGT---
----NTTGGCANN
 A C G T A C G T C G T A A T C G A T G C C G A T A C G T A C T G A C T G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G