p-value: | 1e-11 |
log p-value: | -2.719e+01 |
Information Content per bp: | 1.695 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 1.24% |
Number of Background Sequences with motif | 6.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 42.3 +/- 27.6bp |
Average Position of motif in Background | 49.5 +/- 24.6bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0067.1_Sox18_1/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----ATTGTGATAAACCAAA TTCAATTGTTCTAAAA---- |
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PB0062.1_Sox12_1/Jaspar
Match Rank: | 2 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ATTGTGATAAACCAAA TAATTGTTCTAAAC---- |
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SRY/MA0084.1/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATTGTGATAAACCAAA ATTGTTTAN------- |
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PB0165.1_Sox11_2/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATTGTGATAAACCAAA AAAATTGTTATGAA----- |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----ATTGTGATAAACCAAA NNTTTATTGTTCTNNN----- |
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Sox5/MA0087.1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATTGTGATAAACCAAA ATTGTTA--------- |
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PB0074.1_Sox8_1/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------ATTGTGATAAACCAAA GTATCTATTGTTCTTTA----- |
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PB0065.1_Sox15_1/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------ATTGTGATAAACCAAA ANNTCTATTGTTCNNNA----- |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----ATTGTGATAAACCAAA AANTTATTGTTCTNNA----- |
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Sox17/MA0078.1/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATTGTGATAAACCAAA CTCATTGTC---------- |
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