Information for 18-TCCACTGACCTGTAGY (Motif 37)

A C G T G A T C A G T C C G T A A G T C A C G T C A T G C T G A A G T C A G T C A C G T A C T G G A C T C T G A C T A G A G C T
Reverse Opposite:
T C G A A G T C A G C T C G T A G T A C G T C A A C T G T A C G A G C T G A T C G T C A T C A G C G A T A C T G C A T G C G T A
p-value:1e-6
log p-value:-1.521e+01
Information Content per bp:1.708
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif21.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.0 +/- 26.0bp
Average Position of motif in Background55.3 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCCACTGACCTGTAGY
-NNACTTACCTN----
 A C G T G A T C A G T C C G T A A G T C A C G T C A T G C T G A A G T C A G T C A C G T A C T G G A C T C T G A C T A G A G C T
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCCACTGACCTGTAGY
-CNNTTGACCTTTG--
 A C G T G A T C A G T C C G T A A G T C A C G T C A T G C T G A A G T C A G T C A C G T A C T G G A C T C T G A C T A G A G C T
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCCACTGACCTGTAGY
AGGTCANTGACCTN----
 A C G T A C G T A C G T G A T C A G T C C G T A A G T C A C G T C A T G C T G A A G T C A G T C A C G T A C T G G A C T C T G A C T A G A G C T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TCCACTGACCTGTAGY
-----TGACCT-----
 A C G T G A T C A G T C C G T A A G T C A C G T C A T G C T G A A G T C A G T C A C G T A C T G G A C T C T G A C T A G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TCCACTGACCTGTAGY
-----TGACCTYA---
 A C G T G A T C A G T C C G T A A G T C A C G T C A T G C T G A A G T C A G T C A C G T A C T G G A C T C T G A C T A G A G C T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCCACTGACCTGTAGY
----GTGACCTT----
 A C G T G A T C A G T C C G T A A G T C A C G T C A T G C T G A A G T C A G T C A C G T A C T G G A C T C T G A C T A G A G C T
A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TCCACTGACCTGTAGY-----
-----TGACCTNTAGTAACCC
 A C G T G A T C A G T C C G T A A G T C A C G T C A T G C T G A A G T C A G T C A C G T A C T G G A C T C T G A C T A G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TCCACTGACCTGTAGY
----CTGACCTTTG--
 A C G T G A T C A G T C C G T A A G T C A C G T C A T G C T G A A G T C A G T C A C G T A C T G G A C T C T G A C T A G A G C T
A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TCCACTGACCTGTAGY
-----TGACCTTGAT-
 A C G T G A T C A G T C C G T A A G T C A C G T C A T G C T G A A G T C A G T C A C G T A C T G G A C T C T G A C T A G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCCACTGACCTGTAGY
ATCCAC-----------
 A C G T A C G T G A T C A G T C C G T A A G T C A C G T C A T G C T G A A G T C A G T C A C G T A C T G G A C T C T G A C T A G A G C T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T