Information for 10-GGATGTCTAT (Motif 34)

C A T G C T A G T G C A C G A T A C T G A G C T T A G C G A C T T C G A A G C T
Reverse Opposite:
T C G A A G C T C T G A A T C G T C G A G T A C G C T A A C G T G A T C G T A C
p-value:1e-6
log p-value:-1.566e+01
Information Content per bp:1.535
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif4.78%
Number of Background Sequences with motif707.6
Percentage of Background Sequences with motif1.47%
Average Position of motif in Targets49.4 +/- 26.3bp
Average Position of motif in Background49.9 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGATGTCTAT
--TWGTCTGV
 C A T G C T A G T G C A C G A T A C T G A G C T T A G C G A C T T C G A A G C T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

TEAD4/MA0809.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGATGTCTAT
NTGGAATGTN---
 A C G T A C G T A C G T C A T G C T A G T G C A C G A T A C T G A G C T T A G C G A C T T C G A A G C T
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGATGTCTAT
NTGGAATGTG---
 A C G T A C G T A C G T C A T G C T A G T G C A C G A T A C T G A G C T T A G C G A C T T C G A A G C T
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGATGTCTAT
--TTGTTTAC
 C A T G C T A G T G C A C G A T A C T G A G C T T A G C G A C T T C G A A G C T
A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

TEAD3/MA0808.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGATGTCTAT
TGGAATGT----
 A C G T A C G T C A T G C T A G T G C A C G A T A C T G A G C T T A G C G A C T T C G A A G C T
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGATGTCTAT----
--NTGTTTAYATWW
 C A T G C T A G T G C A C G A T A C T G A G C T T A G C G A C T T C G A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGATGTCTAT--
--ATGMATATDC
 C A T G C T A G T G C A C G A T A C T G A G C T T A G C G A C T T C G A A G C T A C G T A C G T
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGATGTCTAT-
TATTGTTTATT
 C A T G C T A G T G C A C G A T A C T G A G C T T A G C G A C T T C G A A G C T A C G T
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGATGTCTAT---
---TGTCTAGACG
 C A T G C T A G T G C A C G A T A C T G A G C T T A G C G A C T T C G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGATGTCTAT
VBSYGTCTGG
 C A T G C T A G T G C A C G A T A C T G A G C T T A G C G A C T T C G A A G C T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G