Information for 17-GAMCAGGGCTCAGTGA (Motif 30)

A C T G C G T A G T C A A G T C C G T A C T A G C T A G A C T G A T G C A G C T T A G C G T C A A T C G G A C T A T C G G T C A
Reverse Opposite:
A C G T A T G C C T G A A T G C A C G T A C T G C T G A A T C G G T A C A G T C A G T C G A C T T A C G A C G T A C G T A G T C
p-value:1e-7
log p-value:-1.717e+01
Information Content per bp:1.720
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif15.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.7 +/- 27.7bp
Average Position of motif in Background51.2 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GAMCAGGGCTCAGTGA
NNAGGGACAAGGGCNC-----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T C A A G T C C G T A C T A G C T A G A C T G A T G C A G C T T A G C G T C A A T C G G A C T A T C G G T C A
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAMCAGGGCTCAGTGA
CGAACAGTGCTCACTAT
 A C G T A C T G C G T A G T C A A G T C C G T A C T A G C T A G A C T G A T G C A G C T T A G C G T C A A T C G G A C T A T C G G T C A
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GAMCAGGGCTCAGTGA-
GGCGAGGGGTCAAGGGC
 A C T G C G T A G T C A A G T C C G T A C T A G C T A G A C T G A T G C A G C T T A G C G T C A A T C G G A C T A T C G G T C A A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GAMCAGGGCTCAGTGA
----AGRGGTCA----
 A C T G C G T A G T C A A G T C C G T A C T A G C T A G A C T G A T G C A G C T T A G C G T C A A T C G G A C T A T C G G T C A
A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GAMCAGGGCTCAGTGA--
---NAGGTCACNNTGACC
 A C T G C G T A G T C A A G T C C G T A C T A G C T A G A C T G A T G C A G C T T A G C G T C A A T C G G A C T A T C G G T C A A C G T A C G T
A C G T A C G T A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

PPARG/MA0066.1/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GAMCAGGGCTCAGTGA-----
-AGTAGGTCACNGTGACCTAC
 A C T G C G T A G T C A A G T C C G T A C T A G C T A G A C T G A T G C A G C T T A G C G T C A A T C G G A C T A T C G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A A T C G C A G T C T G A C T A G A C T G C A G T A T G C G T C A G A T C T A G C A C T G C A G T A T C G T G C A G A T C A T G C A G C T C G T A A T G C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GAMCAGGGCTCAGTGA---
-----NAGGTCANTGACCT
 A C T G C G T A G T C A A G T C C G T A C T A G C T A G A C T G A T G C A G C T T A G C G T C A A T C G G A C T A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

ESR1/MA0112.3/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GAMCAGGGCTCAGTGA----
---CAGGTCACCGTGACCTT
 A C T G C G T A G T C A A G T C C G T A C T A G C T A G A C T G A T G C A G C T T A G C G T C A A T C G G A C T A T C G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

ESR2/MA0258.2/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GAMCAGGGCTCAGTGA---
----AGGNCANNGTGACCT
 A C T G C G T A G T C A A G T C C G T A C T A G C T A G A C T G A T G C A G C T T A G C G T C A A T C G G A C T A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

PB0047.1_Myf6_1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---GAMCAGGGCTCAGTGA
GAAGAACAGGTGTCCG---
 A C G T A C G T A C G T A C T G C G T A G T C A A G T C C G T A C T A G C T A G A C T G A T G C A G C T T A G C G T C A A T C G G A C T A T C G G T C A
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G A C G T A C G T A C G T