Information for 2-GCCCACCASAGGCACC (Motif 3)

A C T G T A G C A T G C A G T C G T C A A G T C A G T C G T C A A T C G T C G A A T C G C T A G A T G C C G T A A G T C A G T C
Reverse Opposite:
C T A G C T A G A C G T A T C G A G T C A T G C A G C T A T G C A C G T A C T G A C T G A C G T C T A G A T C G A C T G G T A C
p-value:1e-13
log p-value:-3.201e+01
Information Content per bp:1.743
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.6 +/- 26.1bp
Average Position of motif in Background68.1 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCCACCASAGGCACC
-AGCAACAGCCGCACC
 A C T G T A G C A T G C A G T C G T C A A G T C A G T C G T C A A T C G T C G A A T C G C T A G A T G C C G T A A G T C A G T C
A C G T T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCCCACCASAGGCACC
CATAAGACCACCATTAC----
 A C G T A C G T A C G T A C G T A C G T A C T G T A G C A T G C A G T C G T C A A G T C A G T C G T C A A T C G T C G A A T C G C T A G A T G C C G T A A G T C A G T C
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCCCACCASAGGCACC
---CGCCTCAGGCA--
 A C T G T A G C A T G C A G T C G T C A A G T C A G T C G T C A A T C G T C G A A T C G C T A G A T G C C G T A A G T C A G T C
A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCCCACCASAGGCACC
---AGCCTCAGGCA--
 A C T G T A G C A T G C A G T C G T C A A G T C A G T C G T C A A T C G T C G A A T C G C T A G A T G C C G T A A G T C A G T C
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCCCACCASAGGCACC
GCGACCACCGAA------
 A C G T A C G T A C T G T A G C A T G C A G T C G T C A A G T C A G T C G T C A A T C G T C G A A T C G C T A G A T G C C G T A A G T C A G T C
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCCCACCASAGGCACC
---AGCCTCAGGCA--
 A C T G T A G C A T G C A G T C G T C A A G T C A G T C G T C A A T C G T C G A A T C G C T A G A T G C C G T A A G T C A G T C
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCCCACCASAGGCACC
GCGACCACCGAA------
 A C G T A C G T A C T G T A G C A T G C A G T C G T C A A G T C A G T C G T C A A T C G T C G A A T C G C T A G A T G C C G T A A G T C A G T C
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCCCACCASAGGCACC
GGACCACCCACG-----
 A C G T A C T G T A G C A T G C A G T C G T C A A G T C A G T C G T C A A T C G T C G A A T C G C T A G A T G C C G T A A G T C A G T C
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCCCACCASAGGCACC
-CCCCCCCGGGGGNN-
 A C T G T A G C A T G C A G T C G T C A A G T C A G T C G T C A A T C G T C G A A T C G C T A G A T G C C G T A A G T C A G T C
A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCCCACCASAGGCACC
GGCGACCACCGA-------
 A C G T A C G T A C G T A C T G T A G C A T G C A G T C G T C A A G T C A G T C G T C A A T C G T C G A A T C G C T A G A T G C C G T A A G T C A G T C
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T