Information for 7-MAATTCAAGW (Motif 28)

G T C A C G T A C G T A A C G T C A G T A T G C G T C A C G T A A T C G C G A T
Reverse Opposite:
G C T A A T G C A C G T A C G T A T C G G T C A C G T A C G A T A C G T A C G T
p-value:1e-8
log p-value:-1.876e+01
Information Content per bp:1.788
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif4.60%
Number of Background Sequences with motif564.1
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets47.9 +/- 27.6bp
Average Position of motif in Background50.8 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---MAATTCAAGW---
AATCAATTCAATAATT
 A C G T A C G T A C G T G T C A C G T A C G T A A C G T C A G T A T G C G T C A C G T A A T C G C G A T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:MAATTCAAGW------
AAATTCAAGTGGNTTN
 G T C A C G T A C G T A A C G T C A G T A T G C G T C A C G T A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:MAATTCAAGW------
AANTTCAAGTGGCTTN
 G T C A C G T A C G T A A C G T C A G T A T G C G T C A C G T A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PB0171.1_Sox18_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----MAATTCAAGW-
GGACTGAATTCATGCC
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A A C G T C A G T A T G C G T C A C G T A A T C G C G A T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:MAATTCAAGW------
AATTTCAAGTGGCTTN
 G T C A C G T A C G T A A C G T C A G T A T G C G T C A C G T A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-MAATTCAAGW
AAAAGTCAA--
 A C G T G T C A C G T A C G T A A C G T C A G T A T G C G T C A C G T A A T C G C G A T
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-MAATTCAAGW------
NANTTTCAAGTGGTTAN
 A C G T G T C A C G T A C G T A A C G T C A G T A T G C G T C A C G T A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:MAATTCAAGW----
ACATTCATGACACG
 G T C A C G T A C G T A A C G T C A G T A T G C G T C A C G T A A T C G C G A T A C G T A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:MAATTCAAGW
-NATTCAAAT
 G T C A C G T A C G T A A C G T C A G T A T G C G T C A C G T A A T C G C G A T
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:MAATTCAAGW
GCATTCCAGN
 G T C A C G T A C G T A A C G T C A G T A T G C G T C A C G T A A T C G C G A T
C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G