Information for 6-ATGGGCTCTC (Motif 27)

G C T A A C G T A T C G C T A G C T A G A G T C A C G T T G A C A C G T A G T C
Reverse Opposite:
T C A G C G T A A C T G G T C A A C T G A G T C A G T C A T G C G T C A C G A T
p-value:1e-8
log p-value:-1.923e+01
Information Content per bp:1.834
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif100.9
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets56.5 +/- 25.4bp
Average Position of motif in Background47.9 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATGGGCTCTC--
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T G C T A A C G T A T C G C T A G C T A G A G T C A C G T T G A C A C G T A G T C A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATGGGCTCTC---
TATTATGGGATGGATAA
 A C G T A C G T A C G T A C G T G C T A A C G T A T C G C T A G C T A G A G T C A C G T T G A C A C G T A G T C A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATGGGCTCTC---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T G C T A A C G T A T C G C T A G C T A G A G T C A C G T T G A C A C G T A G T C A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATGGGCTCTC--
--AASCACTCAA
 G C T A A C G T A T C G C T A G C T A G A G T C A C G T T G A C A C G T A G T C A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ATGGGCTCTC
---NGCTN--
 G C T A A C G T A T C G C T A G C T A G A G T C A C G T T G A C A C G T A G T C
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGGGCTCTC------
AATGGGGTATCACGTTT
 A C G T G C T A A C G T A T C G C T A G C T A G A G T C A C G T T G A C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGGGCTCTC------
AATAGGGTATCAATTAT
 A C G T G C T A A C G T A T C G C T A G C T A G A G T C A C G T T G A C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

Six3/MA0631.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGGGCTCTC------
GATAGGGTATCACTAAT
 A C G T G C T A A C G T A T C G C T A G C T A G A G T C A C G T T G A C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGGGCTCTC------
GATAGGGTATCACTAAT
 A C G T G C T A A C G T A T C G C T A G C T A G A G T C A C G T T G A C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ATGGGCTCTC----
NNNGGGGCGCCCCCNN
 A C G T A C G T G C T A A C G T A T C G C T A G C T A G A G T C A C G T T G A C A C G T A G T C A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A