Motif 26

Information for 5-GCCTCCGCGC (Motif 26)

Reverse Opposite:

p-value:	1e-8
log p-value:	-1.925e+01
Information Content per bp:	1.843
Number of Target Sequences with motif	11.0
Percentage of Target Sequences with motif	1.95%
Number of Background Sequences with motif	79.3
Percentage of Background Sequences with motif	0.16%
Average Position of motif in Targets	52.0 +/- 25.6bp
Average Position of motif in Background	51.6 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)	-0.5
Multiplicity (# of sites on avg that occur together)	1.09
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:	1
Score:	0.66
Offset:	-2
Orientation:	forward strand
Alignment:	--GCCTCCGCGC CAACGTCCGCGG

NRF1/MA0506.1/Jaspar

Match Rank:	2
Score:	0.61
Offset:	-2
Orientation:	forward strand
Alignment:	--GCCTCCGCGC GCGCCTGCGCA-

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:	3
Score:	0.61
Offset:	-1
Orientation:	reverse strand
Alignment:	-GCCTCCGCGC- TGCCCNGGGGCA

PB0199.1_Zfp161_2/Jaspar

Match Rank:	4
Score:	0.61
Offset:	3
Orientation:	forward strand
Alignment:	GCCTCCGCGC------- ---GCCGCGCAGTGCGT

TFAP2B/MA0811.1/Jaspar

Match Rank:	5
Score:	0.61
Offset:	-1
Orientation:	reverse strand
Alignment:	-GCCTCCGCGC- TGCCCTNGGGCA

TFAP2C/MA0524.2/Jaspar

Match Rank:	6
Score:	0.60
Offset:	-1
Orientation:	reverse strand
Alignment:	-GCCTCCGCGC- TGCCCTNGGGCA

PB0010.1_Egr1_1/Jaspar

Match Rank:	7
Score:	0.60
Offset:	-3
Orientation:	forward strand
Alignment:	---GCCTCCGCGC- TCCGCCCCCGCATT

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:	8
Score:	0.59
Offset:	1
Orientation:	reverse strand
Alignment:	GCCTCCGCGC--- -GCTCCGCCCMCY

POL011.1_XCPE1/Jaspar

Match Rank:	9
Score:	0.59
Offset:	0
Orientation:	reverse strand
Alignment:	GCCTCCGCGC GGTCCCGCCC

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:	10
Score:	0.59
Offset:	0
Orientation:	reverse strand
Alignment:	GCCTCCGCGC-- GCCTCAGGGCAT