Information for 3-GGGGACAAAG (Motif 22)

C T A G C T A G C A T G T C A G T C G A T G A C C G T A G T C A C T G A A C T G
Reverse Opposite:
G T A C A G C T A C G T A C G T A C T G A G C T A G T C G T A C A G T C G A T C
p-value:1e-9
log p-value:-2.087e+01
Information Content per bp:1.808
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif5.31%
Number of Background Sequences with motif667.1
Percentage of Background Sequences with motif1.39%
Average Position of motif in Targets56.9 +/- 23.6bp
Average Position of motif in Background52.0 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:GGGGACAAAG-
-GGAACAAAGR
 C T A G C T A G C A T G T C A G T C G A T G A C C G T A G T C A C T G A A C T G A C G T
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GGGGACAAAG-
-VRRACAAWGG
 C T A G C T A G C A T G T C A G T C G A T G A C C G T A G T C A C T G A A C T G A C G T
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GGGGACAAAG-
-AAAACAAAGG
 C T A G C T A G C A T G T C A G T C G A T G A C C G T A G T C A C T G A A C T G A C G T
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:GGGGACAAAG
----ACAAAG
 C T A G C T A G C A T G T C A G T C G A T G A C C G T A G T C A C T G A A C T G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GGGGACAAAG-
-AAAACAATGG
 C T A G C T A G C A T G T C A G T C G A T G A C C G T A G T C A C T G A A C T G A C G T
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGGACAAAG----
AGAGTCCAAAGTCCA
 A C G T C T A G C T A G C A T G T C A G T C G A T G A C C G T A G T C A C T G A A C T G A C G T A C G T A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GGGGACAAAG-
---RACAAWGG
 C T A G C T A G C A T G T C A G T C G A T G A C C G T A G T C A C T G A A C T G A C G T
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGGGACAAAG-----
AGAAGAACAAAGGACTA
 A C G T A C G T C T A G C T A G C A T G T C A G T C G A T G A C C G T A G T C A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGGGACAAAG------
GGGGTCAAAGTCCAAT
 C T A G C T A G C A T G T C A G T C G A T G A C C G T A G T C A C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GGGGACAAAG-
---AACAAAGG
 C T A G C T A G C A T G T C A G T C G A T G A C C G T A G T C A C T G A A C T G A C G T
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G