Information for 13-GGCCTACCTGTCTGCC (Motif 20)

A C T G A C T G A G T C A G T C A C G T G T C A A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A T C A G C G T A A G T C C G T A C T A G A C T G C A G T C G T A A C T G A C T G A G T C G T A C
p-value:1e-9
log p-value:-2.097e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.5 +/- 21.9bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GGCCTACCTGTCTGCC
-------CTGTCTGG-
 A C T G A C T G A G T C A G T C A C G T G T C A A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GGCCTACCTGTCTGCC
-----VBSYGTCTGG-
 A C T G A C T G A G T C A G T C A C G T G T C A A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCCTACCTGTCTGCC
GTCATGCHTGRCTGS-
 A C T G A C T G A G T C A G T C A C G T G T C A A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C T G A G T C A G T C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCCTACCTGTCTGCC
-RYHYACCTGB-----
 A C T G A C T G A G T C A G T C A C G T G T C A A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C T G A G T C A G T C
A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GGCCTACCTGTCTGCC----
-------CTGTCTGTCACCT
 A C T G A C T G A G T C A G T C A C G T G T C A A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GGCCTACCTGTCTGCC
-------TWGTCTGV-
 A C T G A C T G A G T C A G T C A C G T G T C A A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GGCCTACCTGTCTGCC----
--------TGTCTGDCACCT
 A C T G A C T G A G T C A G T C A C G T G T C A A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGCCTACCTGTCTGCC
AGGCCTAG---------
 A C G T A C T G A C T G A G T C A G T C A C G T G T C A A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C T G A G T C A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGCCTACCTGTCTGCC
--ACTTCCTGTT----
 A C T G A C T G A G T C A G T C A C G T G T C A A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C T G A G T C A G T C
A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GGCCTACCTGTCTGCC
---NCACCTGTN----
 A C T G A C T G A G T C A G T C A C G T G T C A A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C T G A G T C A G T C
A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T