Information for 12-CAKTCAAGAAGYAYAG (Motif 18)

A G T C G T C A A C T G A G C T G T A C C G T A T C G A C T A G C T G A C G T A A C T G A G C T G T C A A G C T C G T A C T A G
Reverse Opposite:
A G T C A C G T C T G A A C G T C T G A A G T C C G A T A G C T G A T C A G C T A C G T C A T G C T G A G T A C A C G T A C T G
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.755
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.3 +/- 23.6bp
Average Position of motif in Background22.9 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAKTCAAGAAGYAYAG
CCAATCAA---------
 A C G T A G T C G T C A A C T G A G C T G T A C C G T A T C G A C T A G C T G A C G T A A C T G A G C T G T C A A G C T C G T A C T A G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU4F2/MA0683.1/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAKTCAAGAAGYAYAG
CTCATTAATTATGCAT--
 A C G T A C G T A G T C G T C A A C T G A G C T G T A C C G T A T C G A C T A G C T G A C G T A A C T G A G C T G T C A A G C T C G T A C T A G
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------CAKTCAAGAAGYAYAG
NNCATTCATTCATNNN------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A G C T G T A C C G T A T C G A C T A G C T G A C G T A A C T G A G C T G T C A A G C T C G T A C T A G
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CAKTCAAGAAGYAYAG
GACCACATTCATACAAT----
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A G C T G T A C C G T A T C G A C T A G C T G A C G T A A C T G A G C T G T C A A G C T C G T A C T A G
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CAKTCAAGAAGYAYAG
ACATTCATGACACG---
 A C G T A G T C G T C A A C T G A G C T G T A C C G T A T C G A C T A G C T G A C G T A A C T G A G C T G T C A A G C T C G T A C T A G
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G A C G T A C G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CAKTCAAGAAGYAYAG
CTCATTAATTATGCAT--
 A C G T A C G T A G T C G T C A A C T G A G C T G T A C C G T A T C G A C T A G C T G A C G T A A C T G A G C T G T C A A G C T C G T A C T A G
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CAKTCAAGAAGYAYAG
SCTGTCAVTCAV---------
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C T G A G C T G T A C C G T A T C G A C T A G C T G A C G T A A C T G A G C T G T C A A G C T C G T A C T A G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CAKTCAAGAAGYAYAG
CATTAATTATTCAT--
 A G T C G T C A A C T G A G C T G T A C C G T A T C G A C T A G C T G A C G T A A C T G A G C T G T C A A G C T C G T A C T A G
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CAKTCAAGAAGYAYAG
AGCCACTCAAG--------
 A C G T A C G T A C G T A G T C G T C A A C T G A G C T G T A C C G T A T C G A C T A G C T G A C G T A A C T G A G C T G T C A A G C T C G T A C T A G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.48
Offset:3
Orientation:forward strand
Alignment:CAKTCAAGAAGYAYAG
---ACAGGAAGTG---
 A G T C G T C A A C T G A G C T G T A C C G T A T C G A C T A G C T G A C G T A A C T G A G C T G T C A A G C T C G T A C T A G
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T