Information for 7-CGCTTTGTGAGTG (Motif 11)

G T A C A C T G G T A C A G C T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G A T A G T C C G T A A G T C C G T A C G T A C T G A A C T G A G T C A C T G
p-value:1e-9
log p-value:-2.101e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.6 +/- 18.4bp
Average Position of motif in Background47.6 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGCTTTGTGAGTG
--CTTTGT-----
 G T A C A C T G G T A C A G C T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGCTTTGTGAGTG
-CCWTTGTYYB--
 G T A C A C T G G T A C A G C T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGCTTTGTGAGTG
AGGVNCCTTTGT-----
 A C G T A C G T A C G T A C G T G T A C A C T G G T A C A G C T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CGCTTTGTGAGTG---
-----CTTGAGTGGCT
 G T A C A C T G G T A C A G C T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGCTTTGTGAGTG
-CCWTTGTY----
 G T A C A C T G G T A C A G C T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CGCTTTGTGAGTG---
------TTRAGTGSYK
 G T A C A C T G G T A C A G C T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CGCTTTGTGAGTG---
------TTAAGTGCTT
 G T A C A C T G G T A C A G C T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

ZNF143/MA0088.2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CGCTTTGTGAGTG
CAATGCATTGTGGGTA
 A C G T A C G T A C G T G T A C A C T G G T A C A G C T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGCTTTGTGAGTG-
ANTCCTTTGTCTNNNN
 A C G T A C G T G T A C A C T G G T A C A G C T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CGCTTTGTGAGTG---
------TTGAGTGSTT
 G T A C A C T G G T A C A G C T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T