Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 885)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 46795)	% of Background Sequences with Motif
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-836	-1.926e+03	0.0000	512.0	57.85%	341.6	0.73%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-682	-1.572e+03	0.0000	512.0	57.85%	684.9	1.46%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-18	-4.356e+01	0.0000	229.0	25.88%	6714.8	14.29%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-17	-3.929e+01	0.0000	112.0	12.66%	2435.6	5.18%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-15	-3.663e+01	0.0000	15.0	1.69%	31.2	0.07%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-11	-2.667e+01	0.0000	86.0	9.72%	1999.4	4.25%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-11	-2.533e+01	0.0000	98.0	11.07%	2488.5	5.30%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-7	-1.818e+01	0.0000	239.0	27.01%	9045.4	19.25%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-7	-1.782e+01	0.0000	166.0	18.76%	5754.1	12.25%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e-7	-1.734e+01	0.0000	85.0	9.60%	2395.8	5.10%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-7	-1.625e+01	0.0000	171.0	19.32%	6116.8	13.02%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e-7	-1.613e+01	0.0000	118.0	13.33%	3815.6	8.12%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-6	-1.386e+01	0.0000	154.0	17.40%	5580.6	11.88%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-5	-1.258e+01	0.0001	240.0	27.12%	9744.7	20.74%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-5	-1.234e+01	0.0001	40.0	4.52%	959.5	2.04%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-5	-1.222e+01	0.0001	359.0	40.56%	15694.6	33.40%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-4	-1.066e+01	0.0005	56.0	6.33%	1646.5	3.50%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-4	-1.017e+01	0.0008	127.0	14.35%	4738.4	10.08%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-3	-7.521e+00	0.0104	99.0	11.19%	3761.5	8.00%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e-3	-7.520e+00	0.0104	184.0	20.79%	7771.7	16.54%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e-2	-6.887e+00	0.0177	39.0	4.41%	1207.1	2.57%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e-2	-6.083e+00	0.0377	15.0	1.69%	337.3	0.72%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-2	-5.509e+00	0.0641	88.0	9.94%	3504.8	7.46%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e-2	-5.128e+00	0.0899	146.0	16.50%	6335.0	13.48%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e-2	-4.989e+00	0.0992	21.0	2.37%	608.1	1.29%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-2	-4.918e+00	0.1024	141.0	15.93%	6130.6	13.05%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-2	-4.834e+00	0.1072	40.0	4.52%	1410.2	3.00%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-2	-4.790e+00	0.1080	27.0	3.05%	862.9	1.84%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e-1	-4.575e+00	0.1293	129.0	14.58%	5610.0	11.94%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-1	-4.547e+00	0.1293	102.0	11.53%	4309.1	9.17%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e-1	-4.395e+00	0.1449	21.0	2.37%	644.9	1.37%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e-1	-4.062e+00	0.1957	29.0	3.28%	1003.6	2.14%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-1	-4.051e+00	0.1957	84.0	9.49%	3530.3	7.51%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-1	-4.001e+00	0.1958	125.0	14.12%	5525.1	11.76%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-1	-3.901e+00	0.2103	14.0	1.58%	396.3	0.84%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e-1	-3.710e+00	0.2475	8.0	0.90%	183.0	0.39%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e-1	-3.595e+00	0.2703	14.0	1.58%	413.5	0.88%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-1	-3.330e+00	0.3429	4.0	0.45%	65.9	0.14%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e-1	-3.079e+00	0.4292	8.0	0.90%	208.4	0.44%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e-1	-2.735e+00	0.5905	17.0	1.92%	598.4	1.27%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e-1	-2.711e+00	0.5905	61.0	6.89%	2655.4	5.65%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e-1	-2.651e+00	0.6120	5.0	0.56%	116.2	0.25%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e-1	-2.576e+00	0.6443	16.0	1.81%	568.8	1.21%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e-1	-2.535e+00	0.6558	20.0	2.26%	749.3	1.59%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e-1	-2.518e+00	0.6558	7.0	0.79%	196.8	0.42%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-1	-2.518e+00	0.6558	82.0	9.27%	3723.5	7.92%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e-1	-2.441e+00	0.6742	2.0	0.23%	26.5	0.06%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e-1	-2.362e+00	0.7143	3.0	0.34%	57.6	0.12%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e-1	-2.334e+00	0.7196	40.0	4.52%	1708.4	3.64%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-2.271e+00	0.7514	35.0	3.95%	1479.8	3.15%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-2.215e+00	0.7793	5.0	0.56%	133.1	0.28%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-2.144e+00	0.8201	18.0	2.03%	699.6	1.49%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-2.011e+00	0.9196	30.0	3.39%	1280.0	2.72%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-2.000e+00	0.9196	2.0	0.23%	34.6	0.07%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.992e+00	0.9196	7.0	0.79%	225.4	0.48%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.983e+00	0.9196	18.0	2.03%	717.6	1.53%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-1.967e+00	0.9196	1.0	0.11%	8.3	0.02%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.888e+00	0.9503	3.0	0.34%	71.2	0.15%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.855e+00	0.9651	64.0	7.23%	2983.8	6.35%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-1.847e+00	0.9651	6.0	0.68%	192.7	0.41%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-1.826e+00	0.9651	197.0	22.26%	9798.6	20.85%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.815e+00	0.9651	12.0	1.36%	459.8	0.98%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-1.799e+00	0.9651	10.0	1.13%	371.0	0.79%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-1.764e+00	0.9745	73.0	8.25%	3459.8	7.36%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-1.735e+00	0.9876	21.0	2.37%	890.9	1.90%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-1.721e+00	0.9876	23.0	2.60%	988.7	2.10%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-1.709e+00	0.9876	10.0	1.13%	378.8	0.81%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-1.616e+00	1.0000	9.0	1.02%	341.3	0.73%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-1.585e+00	1.0000	23.0	2.60%	1009.4	2.15%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-1.552e+00	1.0000	7.0	0.79%	256.0	0.54%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.529e+00	1.0000	24.0	2.71%	1067.3	2.27%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.474e+00	1.0000	2.0	0.23%	48.9	0.10%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.456e+00	1.0000	13.0	1.47%	545.9	1.16%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.436e+00	1.0000	36.0	4.07%	1680.1	3.58%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-1.436e+00	1.0000	33.0	3.73%	1530.9	3.26%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-1.433e+00	1.0000	8.0	0.90%	312.1	0.66%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-1.432e+00	1.0000	13.0	1.47%	548.2	1.17%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-1.426e+00	1.0000	63.0	7.12%	3048.4	6.49%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.392e+00	1.0000	21.0	2.37%	943.3	2.01%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-1.356e+00	1.0000	31.0	3.50%	1447.3	3.08%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.333e+00	1.0000	2.0	0.23%	54.0	0.11%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-1.297e+00	1.0000	167.0	18.87%	8478.1	18.04%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-1.272e+00	1.0000	21.0	2.37%	964.9	2.05%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.245e+00	1.0000	147.0	16.61%	7460.1	15.88%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.236e+00	1.0000	35.0	3.95%	1676.3	3.57%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-1.218e+00	1.0000	46.0	5.20%	2241.6	4.77%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	-1.201e+00	1.0000	1.0	0.11%	19.3	0.04%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.184e+00	1.0000	34.0	3.84%	1638.6	3.49%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.180e+00	1.0000	11.0	1.24%	485.0	1.03%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-1.174e+00	1.0000	63.0	7.12%	3128.1	6.66%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-1.170e+00	1.0000	20.0	2.26%	933.0	1.99%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-1.150e+00	1.0000	7.0	0.79%	293.1	0.62%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.140e+00	1.0000	16.0	1.81%	738.2	1.57%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-1.136e+00	1.0000	8.0	0.90%	343.3	0.73%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.108e+00	1.0000	11.0	1.24%	494.1	1.05%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-1.106e+00	1.0000	56.0	6.33%	2790.3	5.94%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.100e+00	1.0000	6.0	0.68%	250.8	0.53%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-1.095e+00	1.0000	34.0	3.84%	1661.5	3.54%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-1.081e+00	1.0000	1.0	0.11%	22.4	0.05%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-1.075e+00	1.0000	33.0	3.73%	1615.2	3.44%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-1.070e+00	1.0000	32.0	3.62%	1565.3	3.33%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-1.068e+00	1.0000	82.0	9.27%	4153.6	8.84%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-1.041e+00	1.0000	3.0	0.34%	112.1	0.24%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.035e+00	1.0000	12.0	1.36%	556.0	1.18%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.015e+00	1.0000	5.0	0.56%	210.3	0.45%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-9.682e-01	1.0000	2.0	0.23%	70.8	0.15%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-9.583e-01	1.0000	27.0	3.05%	1337.8	2.85%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-9.537e-01	1.0000	4.0	0.45%	167.2	0.36%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-9.522e-01	1.0000	7.0	0.79%	316.9	0.67%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-9.495e-01	1.0000	49.0	5.54%	2481.1	5.28%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-9.464e-01	1.0000	8.0	0.90%	367.8	0.78%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-9.392e-01	1.0000	24.0	2.71%	1187.2	2.53%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-9.127e-01	1.0000	14.0	1.58%	678.6	1.44%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-9.048e-01	1.0000	65.0	7.34%	3335.0	7.10%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-9.038e-01	1.0000	8.0	0.90%	373.6	0.80%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-8.903e-01	1.0000	4.0	0.45%	173.5	0.37%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-8.556e-01	1.0000	45.0	5.08%	2306.3	4.91%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-8.479e-01	1.0000	7.0	0.79%	330.5	0.70%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-8.479e-01	1.0000	7.0	0.79%	330.9	0.70%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-8.473e-01	1.0000	5.0	0.56%	228.0	0.49%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-8.296e-01	1.0000	25.0	2.82%	1268.1	2.70%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-8.218e-01	1.0000	4.0	0.45%	180.3	0.38%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-8.156e-01	1.0000	1.0	0.11%	31.3	0.07%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-8.139e-01	1.0000	5.0	0.56%	232.6	0.50%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-8.017e-01	1.0000	16.0	1.81%	805.8	1.71%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-7.861e-01	1.0000	72.0	8.14%	3756.4	7.99%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-7.677e-01	1.0000	48.0	5.42%	2498.4	5.32%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-7.669e-01	1.0000	69.0	7.80%	3607.2	7.68%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-7.613e-01	1.0000	15.0	1.69%	762.5	1.62%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-7.566e-01	1.0000	26.0	2.94%	1342.7	2.86%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-7.496e-01	1.0000	17.0	1.92%	870.5	1.85%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-7.307e-01	1.0000	3.0	0.34%	138.6	0.29%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-7.300e-01	1.0000	22.0	2.49%	1139.9	2.43%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-7.253e-01	1.0000	6.0	0.68%	296.5	0.63%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-7.060e-01	1.0000	2.0	0.23%	88.8	0.19%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-6.937e-01	1.0000	9.0	1.02%	460.5	0.98%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-6.934e-01	1.0000	8.0	0.90%	408.0	0.87%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-6.925e-01	1.0000	5.0	0.56%	248.5	0.53%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-6.925e-01	1.0000	3.0	0.34%	142.9	0.30%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-6.925e-01	1.0000	3.0	0.34%	142.9	0.30%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-6.896e-01	1.0000	11.0	1.24%	567.9	1.21%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-6.826e-01	1.0000	8.0	0.90%	409.7	0.87%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-6.741e-01	1.0000	3.0	0.34%	144.6	0.31%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-6.678e-01	1.0000	6.0	0.68%	305.8	0.65%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-6.513e-01	1.0000	10.0	1.13%	522.8	1.11%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-6.288e-01	1.0000	23.0	2.60%	1224.8	2.61%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-6.282e-01	1.0000	19.0	2.15%	1010.1	2.15%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-6.246e-01	1.0000	41.0	4.63%	2188.5	4.66%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-5.974e-01	1.0000	26.0	2.94%	1396.9	2.97%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-5.962e-01	1.0000	8.0	0.90%	426.3	0.91%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-5.895e-01	1.0000	7.0	0.79%	373.1	0.79%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-5.877e-01	1.0000	16.0	1.81%	861.9	1.83%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-5.750e-01	1.0000	19.0	2.15%	1027.7	2.19%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-5.726e-01	1.0000	13.0	1.47%	703.1	1.50%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-5.711e-01	1.0000	16.0	1.81%	866.9	1.84%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-5.507e-01	1.0000	31.0	3.50%	1684.0	3.58%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-5.464e-01	1.0000	70.0	7.91%	3783.6	8.05%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-5.396e-01	1.0000	11.0	1.24%	603.8	1.28%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-5.346e-01	1.0000	58.0	6.55%	3146.9	6.70%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-5.337e-01	1.0000	56.0	6.33%	3039.0	6.47%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-5.318e-01	1.0000	1.0	0.11%	47.9	0.10%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-5.239e-01	1.0000	16.0	1.81%	881.4	1.88%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-5.162e-01	1.0000	3.0	0.34%	164.8	0.35%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-4.939e-01	1.0000	1.0	0.11%	50.9	0.11%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-4.917e-01	1.0000	39.0	4.41%	2145.8	4.57%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-4.895e-01	1.0000	23.0	2.60%	1276.7	2.72%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-4.821e-01	1.0000	1.0	0.11%	51.8	0.11%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-4.821e-01	1.0000	1.0	0.11%	51.7	0.11%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-4.710e-01	1.0000	9.0	1.02%	511.2	1.09%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-4.641e-01	1.0000	21.0	2.37%	1177.3	2.51%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-4.639e-01	1.0000	49.0	5.54%	2703.2	5.75%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-4.574e-01	1.0000	86.0	9.72%	4707.2	10.02%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-4.559e-01	1.0000	8.0	0.90%	459.6	0.98%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-4.495e-01	1.0000	25.0	2.82%	1403.9	2.99%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-4.387e-01	1.0000	18.0	2.03%	1022.9	2.18%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-4.285e-01	1.0000	3.0	0.34%	178.5	0.38%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-4.271e-01	1.0000	15.0	1.69%	860.5	1.83%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-4.252e-01	1.0000	12.0	1.36%	693.9	1.48%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-4.116e-01	1.0000	14.0	1.58%	810.9	1.73%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-4.083e-01	1.0000	1.0	0.11%	59.0	0.13%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-4.058e-01	1.0000	8.0	0.90%	473.9	1.01%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-3.960e-01	1.0000	18.0	2.03%	1040.6	2.21%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-3.933e-01	1.0000	19.0	2.15%	1098.0	2.34%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-3.892e-01	1.0000	2.0	0.23%	125.0	0.27%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-3.863e-01	1.0000	79.0	8.93%	4388.7	9.34%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-3.755e-01	1.0000	35.0	3.95%	1993.4	4.24%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-3.702e-01	1.0000	7.0	0.79%	426.2	0.91%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-3.702e-01	1.0000	3.0	0.34%	189.0	0.40%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-3.677e-01	1.0000	4.0	0.45%	250.6	0.53%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-3.631e-01	1.0000	9.0	1.02%	544.6	1.16%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-3.517e-01	1.0000	6.0	0.68%	373.5	0.79%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-3.509e-01	1.0000	4.0	0.45%	254.4	0.54%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-3.498e-01	1.0000	17.0	1.92%	1005.2	2.14%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-3.435e-01	1.0000	5.0	0.56%	316.4	0.67%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-3.413e-01	1.0000	58.0	6.55%	3282.7	6.99%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-3.407e-01	1.0000	13.0	1.47%	782.2	1.66%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-3.375e-01	1.0000	10.0	1.13%	611.1	1.30%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-3.353e-01	1.0000	7.0	0.79%	437.8	0.93%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-3.342e-01	1.0000	11.0	1.24%	670.7	1.43%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-3.313e-01	1.0000	2.0	0.23%	134.8	0.29%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-3.138e-01	1.0000	13.0	1.47%	794.6	1.69%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-3.099e-01	1.0000	27.0	3.05%	1590.4	3.38%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-3.057e-01	1.0000	5.0	0.56%	327.8	0.70%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-2.976e-01	1.0000	1.0	0.11%	72.7	0.15%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-2.936e-01	1.0000	15.0	1.69%	919.4	1.96%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-2.912e-01	1.0000	29.0	3.28%	1715.2	3.65%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-2.892e-01	1.0000	9.0	1.02%	572.9	1.22%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-2.858e-01	1.0000	11.0	1.24%	691.6	1.47%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-2.824e-01	1.0000	2.0	0.23%	144.9	0.31%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-2.807e-01	1.0000	13.0	1.47%	810.4	1.72%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-2.801e-01	1.0000	20.0	2.26%	1213.1	2.58%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-2.761e-01	1.0000	3.0	0.34%	211.7	0.45%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-2.757e-01	1.0000	57.0	6.44%	3287.2	7.00%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-2.754e-01	1.0000	31.0	3.50%	1839.1	3.91%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-2.727e-01	1.0000	1.0	0.11%	76.3	0.16%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-2.617e-01	1.0000	4.0	0.45%	279.8	0.60%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-2.605e-01	1.0000	24.0	2.71%	1454.9	3.10%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-2.604e-01	1.0000	14.0	1.58%	879.0	1.87%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-2.582e-01	1.0000	18.0	2.03%	1112.8	2.37%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-2.578e-01	1.0000	8.0	0.90%	526.4	1.12%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-2.577e-01	1.0000	5.0	0.56%	343.3	0.73%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-2.569e-01	1.0000	7.0	0.79%	466.9	0.99%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-2.549e-01	1.0000	79.0	8.93%	4523.0	9.63%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-2.529e-01	1.0000	34.0	3.84%	2026.3	4.31%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-2.486e-01	1.0000	2.0	0.23%	152.8	0.33%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-2.454e-01	1.0000	19.0	2.15%	1178.2	2.51%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-2.449e-01	1.0000	1.0	0.11%	81.1	0.17%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-2.449e-01	1.0000	1.0	0.11%	81.6	0.17%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-2.384e-01	1.0000	23.0	2.60%	1413.8	3.01%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-2.372e-01	1.0000	6.0	0.68%	413.4	0.88%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e0	-2.349e-01	1.0000	9.0	1.02%	597.8	1.27%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-2.310e-01	1.0000	9.0	1.02%	599.6	1.28%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-2.297e-01	1.0000	1.0	0.11%	84.9	0.18%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-2.225e-01	1.0000	2.0	0.23%	159.1	0.34%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-2.194e-01	1.0000	80.0	9.04%	4624.6	9.84%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-2.189e-01	1.0000	6.0	0.68%	421.8	0.90%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-2.185e-01	1.0000	11.0	1.24%	726.8	1.55%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-2.131e-01	1.0000	108.0	12.20%	6174.7	13.14%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-2.067e-01	1.0000	17.0	1.92%	1089.4	2.32%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e0	-1.980e-01	1.0000	10.0	1.13%	678.4	1.44%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-1.918e-01	1.0000	6.0	0.68%	434.3	0.92%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.909e-01	1.0000	109.0	12.32%	6266.1	13.33%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-1.900e-01	1.0000	10.0	1.13%	684.0	1.46%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.834e-01	1.0000	13.0	1.47%	869.1	1.85%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.699e-01	1.0000	2.0	0.23%	176.7	0.38%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.658e-01	1.0000	30.0	3.39%	1883.9	4.01%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.658e-01	1.0000	20.0	2.26%	1300.9	2.77%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-1.646e-01	1.0000	1.0	0.11%	100.9	0.21%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-1.640e-01	1.0000	23.0	2.60%	1478.0	3.15%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-1.583e-01	1.0000	43.0	4.86%	2638.5	5.61%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-1.572e-01	1.0000	28.0	3.16%	1777.9	3.78%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-1.570e-01	1.0000	18.0	2.03%	1190.7	2.53%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-1.567e-01	1.0000	12.0	1.36%	829.2	1.76%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-1.491e-01	1.0000	10.0	1.13%	712.0	1.52%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-1.427e-01	1.0000	1.0	0.11%	107.7	0.23%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.404e-01	1.0000	10.0	1.13%	719.8	1.53%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.398e-01	1.0000	1.0	0.11%	108.8	0.23%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.395e-01	1.0000	24.0	2.71%	1564.1	3.33%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e0	-1.392e-01	1.0000	6.0	0.68%	465.9	0.99%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-1.381e-01	1.0000	12.0	1.36%	845.2	1.80%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.377e-01	1.0000	7.0	0.79%	531.9	1.13%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.346e-01	1.0000	18.0	2.03%	1213.1	2.58%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-1.313e-01	1.0000	16.0	1.81%	1096.1	2.33%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.278e-01	1.0000	15.0	1.69%	1039.4	2.21%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-1.214e-01	1.0000	6.0	0.68%	478.7	1.02%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e0	-1.182e-01	1.0000	31.0	3.50%	2004.9	4.27%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-1.170e-01	1.0000	19.0	2.15%	1294.4	2.75%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-1.146e-01	1.0000	16.0	1.81%	1115.4	2.37%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.121e-01	1.0000	1.0	0.11%	119.1	0.25%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-9.918e-02	1.0000	14.0	1.58%	1011.7	2.15%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e0	-9.788e-02	1.0000	9.0	1.02%	697.0	1.48%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-9.589e-02	1.0000	6.0	0.68%	500.2	1.06%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-9.562e-02	1.0000	10.0	1.13%	763.6	1.63%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-9.498e-02	1.0000	13.0	1.47%	954.7	2.03%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-9.444e-02	1.0000	70.0	7.91%	4294.7	9.14%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-9.381e-02	1.0000	39.0	4.41%	2515.8	5.35%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-9.311e-02	1.0000	3.0	0.34%	291.1	0.62%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-9.271e-02	1.0000	13.0	1.47%	958.0	2.04%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-9.199e-02	1.0000	52.0	5.88%	3272.7	6.96%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-9.192e-02	1.0000	16.0	1.81%	1146.0	2.44%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-8.931e-02	1.0000	3.0	0.34%	294.6	0.63%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-8.805e-02	1.0000	5.0	0.56%	439.5	0.94%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-8.654e-02	1.0000	61.0	6.89%	3803.0	8.09%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-8.550e-02	1.0000	54.0	6.10%	3403.8	7.24%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-8.341e-02	1.0000	103.0	11.64%	6187.0	13.17%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-7.652e-02	1.0000	5.0	0.56%	451.1	0.96%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-7.396e-02	1.0000	72.0	8.14%	4467.0	9.51%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-7.328e-02	1.0000	69.0	7.80%	4298.9	9.15%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-7.257e-02	1.0000	7.0	0.79%	594.8	1.27%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-6.976e-02	1.0000	1.0	0.11%	143.2	0.30%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-6.094e-02	1.0000	9.0	1.02%	746.2	1.59%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-5.853e-02	1.0000	1.0	0.11%	152.3	0.32%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-5.355e-02	1.0000	30.0	3.39%	2080.1	4.43%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-5.258e-02	1.0000	12.0	1.36%	960.9	2.04%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-5.113e-02	1.0000	7.0	0.79%	627.6	1.34%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-4.543e-02	1.0000	3.0	0.34%	342.1	0.73%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-4.498e-02	1.0000	17.0	1.92%	1301.6	2.77%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-4.168e-02	1.0000	43.0	4.86%	2903.0	6.18%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-4.131e-02	1.0000	23.0	2.60%	1690.1	3.60%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-4.021e-02	1.0000	58.0	6.55%	3793.2	8.07%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-3.825e-02	1.0000	60.0	6.78%	3920.2	8.34%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-3.819e-02	1.0000	62.0	7.01%	4037.3	8.59%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-3.806e-02	1.0000	18.0	2.03%	1386.5	2.95%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-3.540e-02	1.0000	1.0	0.11%	178.2	0.38%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-3.406e-02	1.0000	1.0	0.11%	181.0	0.39%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-3.215e-02	1.0000	1.0	0.11%	183.1	0.39%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-3.040e-02	1.0000	129.0	14.58%	7920.5	16.86%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-3.032e-02	1.0000	67.0	7.57%	4376.7	9.31%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-2.885e-02	1.0000	12.0	1.36%	1026.9	2.19%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-2.825e-02	1.0000	36.0	4.07%	2547.9	5.42%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-2.506e-02	1.0000	1.0	0.11%	196.8	0.42%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-2.292e-02	1.0000	16.0	1.81%	1318.4	2.81%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-2.235e-02	1.0000	3.0	0.34%	391.2	0.83%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-2.234e-02	1.0000	1.0	0.11%	202.4	0.43%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-2.124e-02	1.0000	4.0	0.45%	477.5	1.02%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-2.014e-02	1.0000	30.0	3.39%	2229.2	4.74%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.992e-02	1.0000	1.0	0.11%	208.7	0.44%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-1.801e-02	1.0000	17.0	1.92%	1412.7	3.01%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-1.785e-02	1.0000	59.0	6.67%	4008.4	8.53%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.544e-02	1.0000	18.0	2.03%	1496.5	3.18%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-1.527e-02	1.0000	2.0	0.23%	326.8	0.70%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-1.504e-02	1.0000	129.0	14.58%	8096.9	17.23%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-1.457e-02	1.0000	30.0	3.39%	2275.0	4.84%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.411e-02	1.0000	34.0	3.84%	2530.1	5.38%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-1.309e-02	1.0000	10.0	1.13%	967.5	2.06%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.192e-02	1.0000	11.0	1.24%	1048.0	2.23%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-1.168e-02	1.0000	1.0	0.11%	236.1	0.50%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-1.115e-02	1.0000	81.0	9.15%	5396.9	11.49%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-9.534e-03	1.0000	4.0	0.45%	535.2	1.14%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-9.306e-03	1.0000	167.0	18.87%	10359.3	22.05%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-8.182e-03	1.0000	13.0	1.47%	1226.0	2.61%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-7.338e-03	1.0000	27.0	3.05%	2175.4	4.63%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-7.021e-03	1.0000	38.0	4.29%	2881.4	6.13%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-5.641e-03	1.0000	32.0	3.62%	2531.7	5.39%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-5.550e-03	1.0000	2.0	0.23%	387.1	0.82%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-4.722e-03	1.0000	13.0	1.47%	1279.9	2.72%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-3.617e-03	1.0000	12.0	1.36%	1232.1	2.62%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-2.758e-03	1.0000	6.0	0.68%	793.1	1.69%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-2.143e-03	1.0000	5.0	0.56%	727.4	1.55%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-2.039e-03	1.0000	28.0	3.16%	2397.1	5.10%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-1.361e-03	1.0000	17.0	1.92%	1686.3	3.59%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-2.140e-04	1.0000	66.0	7.46%	5129.2	10.92%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-4.400e-05	1.0000	89.0	10.06%	6778.4	14.42%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-3.300e-05	1.0000	60.0	6.78%	4989.5	10.62%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	63.8	0.14%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	0.000e+00	1.0000	0.0	0.00%	79.4	0.17%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	62.6	0.13%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	28.3	0.06%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	0.000e+00	1.0000	0.0	0.00%	69.2	0.15%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	0.000e+00	1.0000	0.0	0.00%	136.5	0.29%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	0.000e+00	1.0000	0.0	0.00%	80.5	0.17%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	15.1	0.03%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	8.7	0.02%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	15.3	0.03%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	0.000e+00	1.0000	0.0	0.00%	34.0	0.07%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	45.6	0.10%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	0.000e+00	1.0000	0.0	0.00%	241.4	0.51%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	0.000e+00	1.0000	0.0	0.00%	218.2	0.46%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	109.0	0.23%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	5.4	0.01%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	0.000e+00	1.0000	0.0	0.00%	231.0	0.49%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	3.7	0.01%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	31.6	0.07%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	5.6	0.01%