Information for 4-ATKCRGCCMARGMMCA (Motif 8)

C G T A A C G T A C G T A G T C C T A G A C T G A G T C A G T C G T A C G T C A C T A G A C T G G T A C G T A C A G T C G C T A
Reverse Opposite:
C A G T A C T G A C T G A C T G A G T C A G T C A C G T A C T G A C T G A C T G G T A C A G T C A C T G G T C A C G T A A C G T
p-value:1e-11
log p-value:-2.630e+01
Information Content per bp:1.846
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.3 +/- 19.3bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.57
Offset:7
Orientation:forward strand
Alignment:ATKCRGCCMARGMMCA-
-------CCAGGAACAG
 C G T A A C G T A C G T A G T C C T A G A C T G A G T C A G T C G T A C G T C A C T A G A C T G G T A C G T A C A G T C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.52
Offset:3
Orientation:forward strand
Alignment:ATKCRGCCMARGMMCA-
---CCGCCCAAGGGCAG
 C G T A A C G T A C G T A G T C C T A G A C T G A G T C A G T C G T A C G T C A C T A G A C T G G T A C G T A C A G T C G C T A A C G T
A C G T A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ATKCRGCCMARGMMCA
CANAGNNCAAAGTCCA
 C G T A A C G T A C G T A G T C C T A G A C T G A G T C A G T C G T A C G T C A C T A G A C T G G T A C G T A C A G T C G C T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:ATKCRGCCMARGMMCA----
----TGCCAAAATAAACANN
 C G T A A C G T A C G T A G T C C T A G A C T G A G T C A G T C G T A C G T C A C T A G A C T G G T A C G T A C A G T C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:ATKCRGCCMARGMMCA
----TGCCAA------
 C G T A A C G T A C G T A G T C C T A G A C T G A G T C A G T C G T A C G T C A C T A G A C T G G T A C G T A C A G T C G C T A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.50
Offset:7
Orientation:forward strand
Alignment:ATKCRGCCMARGMMCA-
-------CAAAGGTCAG
 C G T A A C G T A C G T A G T C C T A G A C T G A G T C A G T C G T A C G T C A C T A G A C T G G T A C G T A C A G T C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:ATKCRGCCMARGMMCA
-AGAGTCCAAAGTCCA
 C G T A A C G T A C G T A G T C C T A G A C T G A G T C A G T C G T A C G T C A C T A G A C T G G T A C G T A C A G T C G C T A
A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Klf12/MA0742.1/Jaspar

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:ATKCRGCCMARGMMCA----
-----GACCACGCCCTTATT
 C G T A A C G T A C G T A G T C C T A G A C T G A G T C A G T C G T A C G T C A C T A G A C T G G T A C G T A C A G T C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:ATKCRGCCMARGMMCA
----TGCCCAGNHW--
 C G T A A C G T A C G T A G T C C T A G A C T G A G T C A G T C G T A C G T C A C T A G A C T G G T A C G T A C A G T C G C T A
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:ATKCRGCCMARGMMCA--
--GGGGTCAAAGTCCAAT
 C G T A A C G T A C G T A G T C C T A G A C T G A G T C A G T C G T A C G T C A C T A G A C T G G T A C G T A C A G T C G C T A A C G T A C G T
A C G T A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T