Information for 10-AGCTTCGCAG (Motif 13)

C G T A A C T G A G T C A G C T A C G T A T G C T C A G A T G C C G T A A C T G
Reverse Opposite:
A G T C C G A T A T C G A G T C T A C G G T C A C T G A A C T G G T A C A C G T
p-value:1e-7
log p-value:-1.693e+01
Information Content per bp:1.853
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif191.0
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets59.3 +/- 19.4bp
Average Position of motif in Background50.2 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCTTCGCAG
-GCTTCC---
 C G T A A C T G A G T C A G C T A C G T A T G C T C A G A T G C C G T A A C T G
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGCTTCGCAG
CAAGCTT-----
 A C G T A C G T C G T A A C T G A G T C A G C T A C G T A T G C T C A G A T G C C G T A A C T G
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGCTTCGCAG
CGCAGCTGCG---
 A C G T A C G T A C G T C G T A A C T G A G T C A G C T A C G T A T G C T C A G A T G C C G T A A C T G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGCTTCGCAG---
---TGCCCAGNHW
 C G T A A C T G A G T C A G C T A C G T A T G C T C A G A T G C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGCTTCGCAG
--CTTGGCAA
 C G T A A C T G A G T C A G C T A C G T A T G C T C A G A T G C C G T A A C T G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCTTCGCAG
-GCTCCG---
 C G T A A C T G A G T C A G C T A C G T A T G C T C A G A T G C C G T A A C T G
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGCTTCGCAG-
-----CACAGN
 C G T A A C T G A G T C A G C T A C G T A T G C T C A G A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGCTTCGCAG-
-NNTTGGCANN
 C G T A A C T G A G T C A G C T A C G T A T G C T C A G A T G C C G T A A C T G A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCTTCGCAG-
-HTTTCCCASG
 C G T A A C T G A G T C A G C T A C G T A T G C T C A G A T G C C G T A A C T G A C G T
A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCTTCGCAG
CAGCC------
 A C G T C G T A A C T G A G T C A G C T A C G T A T G C T C A G A T G C C G T A A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T