Information for 5-AGAGGACACTGCA (Motif 4)

T C G A A C T G C T G A A T C G A C T G T C G A G T A C C G T A A T G C A C G T T A C G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A A T C G G A C T A C T G A C G T T G A C T A G C A G C T A G T C A G C T
p-value:1e-17
log p-value:-3.996e+01
Information Content per bp:1.721
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif71.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets48.1 +/- 18.4bp
Average Position of motif in Background52.3 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AGAGGACACTGCA-----
-AATCGCACTGCATTCCG
 T C G A A C T G C T G A A T C G A C T G T C G A G T A C C G T A A T G C A C G T T A C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGAGGACACTGCA-
----NSCACTYVAV
 T C G A A C T G C T G A A T C G A C T G T C G A G T A C C G T A A T G C A C G T T A C G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGAGGACACTGCA-
----RSCACTYRAG
 T C G A A C T G C T G A A T C G A C T G T C G A G T A C C G T A A T G C A C G T T A C G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AGAGGACACTGCA-
-----CCACTTGAA
 T C G A A C T G C T G A A T C G A C T G T C G A G T A C C G T A A T G C A C G T T A C G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGAGGACACTGCA
---AASCACTCAA
 T C G A A C T G C T G A A T C G A C T G T C G A G T A C C G T A A T G C A C G T T A C G A G T C C G T A
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGAGGACACTGCA---
----GGGATTGCATNN
 T C G A A C T G C T G A A T C G A C T G T C G A G T A C C G T A A T G C A C G T T A C G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGAGGACACTGCA--
AGATGCTRCTRCCHT
 T C G A A C T G C T G A A T C G A C T G T C G A G T A C C G T A A T G C A C G T T A C G A G T C C G T A A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------AGAGGACACTGCA
TGGCCANNNNNGGAACTGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C T G A A T C G A C T G T C G A G T A C C G T A A T G C A C G T T A C G A G T C C G T A
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGAGGACACTGCA
AGGGAAGTCATTTCT
 A C G T A C G T T C G A A C T G C T G A A T C G A C T G T C G A G T A C C G T A A T G C A C G T T A C G A G T C C G T A
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGACACTGCA---
AADGAGVCANYASTACAGNC
 A C G T A C G T A C G T A C G T T C G A A C T G C T G A A T C G A C T G T C G A G T A C C G T A A T G C A C G T T A C G A G T C C G T A A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C