Information for 12-TAAAATGTCT (Motif 15)

A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C C G T A C G A T A C G T A C G T A C G T C G T A
p-value:1e-7
log p-value:-1.631e+01
Information Content per bp:1.958
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets22.2 +/- 12.8bp
Average Position of motif in Background51.6 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TAAAATGTCT----
AAAATTGTTATGAA
 A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TAAAATGTCT----
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TAAAATGTCT-------
NNTNNTGTCTGGNNTNG
 A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PROX1/MA0794.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAAAATGTCT--
TAAGGCGTCTTG
 A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TAAAATGTCT--
NNATNAATTGTTTNN
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAAAATGTCT
CCAACTGCCA
 A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TAAAATGTCT--
----TWGTCTGV
 A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TAAAATGTCT--
----CTGTCTGG
 A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------TAAAATGTCT
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TAAAATGTCT
CTCATTGTC-
 A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C G T A G T C A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T