Information for 9-GCAAACCCCG (Motif 13)

A T C G G T A C C G T A C G T A C T G A A T G C A T G C A G T C G A T C C A T G
Reverse Opposite:
G T A C C T A G A C T G T A C G A T C G A G C T C G A T A C G T A C T G A T G C
p-value:1e-8
log p-value:-1.945e+01
Information Content per bp:1.841
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif118.7
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets50.7 +/- 22.7bp
Average Position of motif in Background45.6 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCAAACCCCG
GGAAANCCCC
 A T C G G T A C C G T A C G T A C T G A A T G C A T G C A G T C G A T C C A T G
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCAAACCCCG
GGAAATCCCC-
 A C G T A T C G G T A C C G T A C G T A C T G A A T G C A T G C A G T C G A T C C A T G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCAAACCCCG
GGAAATTCCC
 A T C G G T A C C G T A C G T A C T G A A T G C A T G C A G T C G A T C C A T G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCAAACCCCG
GGGGGAATCCCC-
 A C G T A C G T A C G T A T C G G T A C C G T A C G T A C T G A A T G C A T G C A G T C G A T C C A T G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCAAACCCCG
AGATGCAATCCC--
 A C G T A C G T A C G T A C G T A T C G G T A C C G T A C G T A C T G A A T G C A T G C A G T C G A T C C A T G
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAAACCCCG-
GGGAAATCCCCN
 A C G T A T C G G T A C C G T A C G T A C T G A A T G C A T G C A G T C G A T C C A T G A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCAAACCCCG
GGACACACCCCC
 A C G T A C G T A T C G G T A C C G T A C G T A C T G A A T G C A T G C A G T C G A T C C A T G
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCAAACCCCG
GGCCACACCCAN
 A C G T A C G T A T C G G T A C C G T A C G T A C T G A A T G C A T G C A G T C G A T C C A T G
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

ZBTB7B/MA0694.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAAACCCCG--
GCGACCACCGAA
 A T C G G T A C C G T A C G T A C T G A A T G C A T G C A G T C G A T C C A T G A C G T A C G T
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAAACCCCG--
GCGACCACCGAA
 A T C G G T A C C G T A C G T A C T G A A T G C A T G C A G T C G A T C C A T G A C G T A C G T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A