Information for 5-GCAAAAAGCCGCGGCA (Motif 12)

C T A G A G T C C G T A G T C A C G T A C G T A C G T A A C T G A G T C G A T C C T A G A G T C A C T G A C T G A T G C C T G A
Reverse Opposite:
A G C T A T C G A G T C A G T C A C T G A G T C C A T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C T G A G T C
p-value:1e-8
log p-value:-1.950e+01
Information Content per bp:1.877
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.3 +/- 22.6bp
Average Position of motif in Background48.5 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAAAGCCGCGGCA
CAATTGCAAAAATAT------
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G T A G T C A C G T A C G T A C G T A A C T G A G T C G A T C C T A G A G T C A C T G A C T G A T G C C T G A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAAAGCCGCGGCA
VRRACAAWGG-------
 A C G T C T A G A G T C C G T A G T C A C G T A C G T A C G T A A C T G A G T C G A T C C T A G A G T C A C T G A C T G A T G C C T G A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAAAGCCGCGGCA
GGAACAAAGR-------
 A C G T C T A G A G T C C G T A G T C A C G T A C G T A C G T A A C T G A G T C G A T C C T A G A G T C A C T G A C T G A T G C C T G A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCAAAAAGCCGCGGCA
AGCAACAGCCGCACC-
 C T A G A G T C C G T A G T C A C G T A C G T A C G T A A C T G A G T C G A T C C T A G A G T C A C T G A C T G A T G C C T G A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCAAAAAGCCGCGGCA
--ACAAAG--------
 C T A G A G T C C G T A G T C A C G T A C G T A C G T A A C T G A G T C G A T C C T A G A G T C A C T G A C T G A T G C C T G A
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GCAAAAAGCCGCGGCA
--AAAAAGCGGAAGTA
 C T A G A G T C C G T A G T C A C G T A C G T A C G T A A C T G A G T C G A T C C T A G A G T C A C T G A C T G A T G C C T G A
A C G T A C G T T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GCAAAAAGCCGCGGCA--
----CAGGCCNNGGCCNN
 C T A G A G T C C G T A G T C A C G T A C G T A C G T A A C T G A G T C G A T C C T A G A G T C A C T G A C T G A T G C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAAAGCCGCGGCA
AAAACAAAGG-------
 A C G T C T A G A G T C C G T A G T C A C G T A C G T A C G T A A C T G A G T C G A T C C T A G A G T C A C T G A C T G A T G C C T G A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GCAAAAAGCCGCGGCA
GGAGAAAGGTGCGA--
 C T A G A G T C C G T A G T C A C G T A C G T A C G T A A C T G A G T C G A T C C T A G A G T C A C T G A C T G A T G C C T G A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:GCAAAAAGCCGCGGCA---
-CAAAAAGGGGCGTGGCAT
 C T A G A G T C C G T A G T C A C G T A C G T A C G T A A C T G A G T C G A T C C T A G A G T C A C T G A C T G A T G C C T G A A C G T A C G T A C G T
A C G T G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T