Information for 10-CTGCCAGTGATCA (Motif 11)

A G T C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C T G C G T A A G C T A G T C C G T A
Reverse Opposite:
A C G T A C T G C T G A C G A T A G T C C G T A A G T C A C G T A C T G A C T G A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.950e+01
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 28.5bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CTGCCAGTGATCA
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C T G C G T A A G C T A G T C C G T A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTGCCAGTGATCA----
CGAACAGTGCTCACTAT
 A G T C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C T G C G T A A G C T A G T C C G T A A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGCCAGTGATCA
-TGCCAA------
 A G T C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C T G C G T A A G C T A G T C C G T A
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGCCAGTGATCA
VGCTGWCAVB-----
 A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C T G C G T A A G C T A G T C C G T A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGCCAGTGATCA
TTGCCAAG-----
 A G T C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C T G C G T A A G C T A G T C C G T A
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGCCAGTGATCA
SCTGTCAVTCAV--
 A C G T A G T C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C T G C G T A A G C T A G T C C G T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGCCAGTGATCA
CGTGCCAAG-----
 A C G T A G T C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C T G C G T A A G C T A G T C C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGCCAGTGATCA
NCTGTCAATCAN--
 A C G T A G T C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C T G C G T A A G C T A G T C C G T A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTGCCAGTGATCA
GSCTGTCACTCA---
 A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C T G C G T A A G C T A G T C C G T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGCCAGTGATCA
--NCCATTGTTC-
 A G T C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C T G C G T A A G C T A G T C C G T A
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T