Information for 10-TTAGAAACTWRAT (Motif 8)

A C G T G A C T C G T A C T A G C G T A C T G A C G T A G A T C C G A T C G A T T C A G C T G A C G A T
Reverse Opposite:
C G T A G A C T A G T C G C T A C G T A C T A G A C G T A G C T A C G T A G T C G C A T C T G A G T C A
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.684
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif207.3
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets50.4 +/- 27.8bp
Average Position of motif in Background49.4 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTAGAAACTWRAT
TTTGAAACCG---
 A C G T G A C T C G T A C T A G C G T A C T G A C G T A G A T C C G A T C G A T T C A G C T G A C G A T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTAGAAACTWRAT
CCGTATTATAAACAA---
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C T A G C G T A C T G A C G T A G A T C C G A T C G A T T C A G C T G A C G A T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTAGAAACTWRAT--
---GWAAYHTGAKMC
 A C G T G A C T C G T A C T A G C G T A C T G A C G T A G A T C C G A T C G A T T C A G C T G A C G A T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

PB0034.1_Irf4_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTAGAAACTWRAT
CGTATCGAAACCAAA-
 A C G T A C G T A C G T A C G T G A C T C G T A C T A G C G T A C T G A C G T A G A T C C G A T C G A T T C A G C T G A C G A T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTAGAAACTWRAT
GGTTAGAGACCT---
 A C G T A C G T A C G T G A C T C G T A C T A G C G T A C T G A C G T A G A T C C G A T C G A T T C A G C T G A C G A T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTAGAAACTWRAT
AAATAAGAAAAAAC--
 A C G T A C G T A C G T A C G T G A C T C G T A C T A G C G T A C T G A C G T A G A T C C G A T C G A T T C A G C T G A C G A T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TTAGAAACTWRAT
TATCATTAGAACGCT---
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C T A G C G T A C T G A C G T A G A T C C G A T C G A T T C A G C T G A C G A T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTAGAAACTWRAT
ACTGAAACCA---
 A C G T G A C T C G T A C T A G C G T A C T G A C G T A G A T C C G A T C G A T T C A G C T G A C G A T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTAGAAACTWRAT--
---GWAAYHTGABMC
 A C G T G A C T C G T A C T A G C G T A C T G A C G T A G A T C C G A T C G A T T C A G C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TTAGAAACTWRAT
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T A C G T G A C T C G T A C T A G C G T A C T G A C G T A G A T C C G A T C G A T T C A G C T G A C G A T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T