Information for 10-CKKRCTGTCCRKY (Motif 15)

A G T C A C G T A C G T C T A G A G T C A C G T A C T G A C G T A G T C A G T C C T A G A C G T A G C T
Reverse Opposite:
C T G A G T C A A G T C A C T G A C T G C G T A G T A C C G T A A C T G A G T C G T C A G T C A A C T G
p-value:1e-5
log p-value:-1.355e+01
Information Content per bp:1.825
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 31.9bp
Average Position of motif in Background49.9 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CKKRCTGTCCRKY
---GCTGTG----
 A G T C A C G T A C G T C T A G A G T C A C G T A C T G A C G T A G T C A G T C C T A G A C G T A G C T
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CKKRCTGTCCRKY
---GCTGTCAA--
 A G T C A C G T A C G T C T A G A G T C A C G T A C T G A C G T A G T C A G T C C T A G A C G T A G C T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CKKRCTGTCCRKY
VAGRACAKNCTGTBC---
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C T A G A G T C A C G T A C T G A C G T A G T C A G T C C T A G A C G T A G C T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CKKRCTGTCCRKY
----NTGTCAN--
 A G T C A C G T A C G T C T A G A G T C A C G T A C T G A C G T A G T C A G T C C T A G A C G T A G C T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CKKRCTGTCCRKY
---CCTGTCAA--
 A G T C A C G T A C G T C T A G A G T C A C G T A C T G A C G T A G T C A G T C C T A G A C G T A G C T
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CKKRCTGTCCRKY
VAGRACAKWCTGTYC---
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C T A G A G T C A C G T A C T G A C G T A G T C A G T C C T A G A C G T A G C T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CKKRCTGTCCRKY-
--GSCTGTCACTCA
 A G T C A C G T A C G T C T A G A G T C A C G T A C T G A C G T A G T C A G T C C T A G A C G T A G C T A C G T
A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CKKRCTGTCCRKY--
---NCTGTCAATCAN
 A G T C A C G T A C G T C T A G A G T C A C G T A C T G A C G T A G T C A G T C C T A G A C G T A G C T A C G T A C G T
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CKKRCTGTCCRKY
ACTTCCTGTT----
 A C G T A G T C A C G T A C G T C T A G A G T C A C G T A C T G A C G T A G T C A G T C C T A G A C G T A G C T
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CKKRCTGTCCRKY
--VGCTGWCAVB-
 A G T C A C G T A C G T C T A G A G T C A C G T A C T G A C G T A G T C A G T C C T A G A C G T A G C T
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T