Information for 3-SWCTCACTATTCCAGT (Motif 4)

A T C G C G A T A G T C G A C T A G T C C G T A A G T C C G A T C G T A A C G T A C G T A T G C G T A C G C T A A C T G G A C T
Reverse Opposite:
C G T A A G T C C A G T A C T G A T C G C G T A C G T A A C G T C G T A A C T G A C G T A C T G C G T A A C T G C G A T A T C G
p-value:1e-11
log p-value:-2.580e+01
Information Content per bp:1.798
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 24.8bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX4/MA0867.1/Jaspar

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:SWCTCACTATTCCAGT---
---GAACAATTGCAGTGTT
 A T C G C G A T A G T C G A C T A G T C C G T A A G T C C G A T C G T A A C G T A C G T A T G C G T A C G C T A A C T G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-SWCTCACTATTCCAGT
TNCNNAACAATTTTTNC
 A C G T A T C G C G A T A G T C G A C T A G T C C G T A A G T C C G A T C G T A A C G T A C G T A T G C G T A C G C T A A C T G G A C T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

Sox11/MA0869.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:SWCTCACTATTCCAGT---
----AACAATTTCAGTGTT
 A T C G C G A T A G T C G A C T A G T C C G T A A G T C C G A T C G T A A C G T A C G T A T G C G T A C G C T A A C T G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-SWCTCACTATTCCAGT
NNCNNAACAATTNT---
 A C G T A T C G C G A T A G T C G A C T A G T C C G T A A G T C C G A T C G T A A C G T A C G T A T G C G T A C G C T A A C T G G A C T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:SWCTCACTATTCCAGT
------GCATTCCAGN
 A T C G C G A T A G T C G A C T A G T C C G T A A G T C C G A T C G T A A C G T A C G T A T G C G T A C G C T A A C T G G A C T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-SWCTCACTATTCCAGT
NNTNNCAATATTAG---
 A C G T A T C G C G A T A G T C G A C T A G T C C G T A A G T C C G A T C G T A A C G T A C G T A T G C G T A C G C T A A C T G G A C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-SWCTCACTATTCCAGT
NNTNNCAATATTAG---
 A C G T A T C G C G A T A G T C G A C T A G T C C G T A A G T C C G A T C G T A A C G T A C G T A T G C G T A C G C T A A C T G G A C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:SWCTCACTATTCCAGT
CTCACACAATGGCGC-
 A T C G C G A T A G T C G A C T A G T C C G T A A G T C C G A T C G T A A C G T A C G T A T G C G T A C G C T A A C T G G A C T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:SWCTCACTATTCCAGT
------CTATTTTTGG
 A T C G C G A T A G T C G A C T A G T C C G T A A G T C C G A T C G T A A C G T A C G T A T G C G T A C G C T A A C T G G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:SWCTCACTATTCCAGT
------RCATTCCWGG
 A T C G C G A T A G T C G A C T A G T C C G T A A G T C C G A T C G T A A C G T A C G T A T G C G T A C G C T A A C T G G A C T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G