Information for 16-AATATTCTHCCAG (Motif 22)

G T C A C G T A A C G T C T G A A C G T A C G T A G T C A C G T G C T A A G T C G T A C C T G A A T C G
Reverse Opposite:
A T G C A G C T C A T G C T A G C A G T C G T A C T A G C G T A C G T A A G C T C G T A A C G T A C G T
p-value:1e-5
log p-value:-1.315e+01
Information Content per bp:1.798
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif24.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets34.6 +/- 20.9bp
Average Position of motif in Background56.7 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATATTCTHCCAG
AAGATATCCTT----
 A C G T A C G T G T C A C G T A A C G T C T G A A C G T A C G T A G T C A C G T G C T A A G T C G T A C C T G A A T C G
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AATATTCTHCCAG
GAACGTTCTAGAA-
 A C G T G T C A C G T A A C G T C T G A A C G T A C G T A G T C A C G T G C T A A G T C G T A C C T G A A T C G
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A A C G T

HSF2/MA0770.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AATATTCTHCCAG
GAANGTTCTAGAA-
 A C G T G T C A C G T A A C G T C T G A A C G T A C G T A G T C A C G T G C T A A G T C G T A C C T G A A T C G
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------AATATTCTHCCAG
NNTNNCAATATTAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C G T C T G A A C G T A C G T A G T C A C G T G C T A A G T C G T A C C T G A A T C G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------AATATTCTHCCAG
NNTNNCAATATTAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C G T C T G A A C G T A C G T A G T C A C G T G C T A A G T C G T A C C T G A A T C G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AATATTCTHCCAG
GAATATTCAT----
 A C G T G T C A C G T A A C G T C T G A A C G T A C G T A G T C A C G T G C T A A G T C G T A C C T G A A T C G
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AATATTCTHCCAG
TAGAANVTTCTAGAA-
 A C G T A C G T A C G T G T C A C G T A A C G T C T G A A C G T A C G T A G T C A C G T G C T A A G T C G T A C C T G A A T C G
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A A C G T

HSF4/MA0771.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AATATTCTHCCAG
GAANNTTCTAGAA-
 A C G T G T C A C G T A A C G T C T G A A C G T A C G T A G T C A C G T G C T A A G T C G T A C C T G A A T C G
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AATATTCTHCCAG-
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C G T C T G A A C G T A C G T A G T C A C G T G C T A A G T C G T A C C T G A A T C G A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AATATTCTHCCAG
CACATTCCAT---
 G T C A C G T A A C G T C T G A A C G T A C G T A G T C A C G T G C T A A G T C G T A C C T G A A T C G
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T