Information for 2-AGTACCCTTG (Motif 10)

C G T A A T C G A C G T C G T A A G T C A G T C G T A C C G A T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A C T G A C T G A C G T G T C A A T G C A C G T
p-value:1e-9
log p-value:-2.130e+01
Information Content per bp:1.890
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.47%
Number of Background Sequences with motif25.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets64.3 +/- 16.6bp
Average Position of motif in Background51.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGTACCCTTG--
----CCTTTGTT
 C G T A A T C G A C G T C G T A A G T C A G T C G T A C C G A T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGTACCCTTG
AAGACCCYYN
 C G T A A T C G A C G T C G T A A G T C A G T C G T A C C G A T A C G T A C T G
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGTACCCTTG
BNTGDCCTTG
 C G T A A T C G A C G T C G T A A G T C A G T C G T A C C G A T A C G T A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGTACCCTTG--
--TGACCTTGAV
 C G T A A T C G A C G T C G T A A G T C A G T C G T A C C G A T A C G T A C T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGTACCCTTG--
----CCWTTGTY
 C G T A A T C G A C G T C G T A A G T C A G T C G T A C C G A T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGTACCCTTG--
--TGACCTTGAN
 C G T A A T C G A C G T C G T A A G T C A G T C G T A C C G A T A C G T A C T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGTACCCTTG--
AACAATAACATTGTT
 A C G T A C G T A C G T C G T A A T C G A C G T C G T A A G T C A G T C G T A C C G A T A C G T A C T G A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGTACCCTTG----
----CCATTGTTYB
 C G T A A T C G A C G T C G T A A G T C A G T C G T A C C G A T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AGTACCCTTG-
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A C G T C G T A A G T C A G T C G T A C C G A T A C G T A C T G A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGTACCCTTG-------
-GAGCCCTTGTCCCTAA
 C G T A A T C G A C G T C G T A A G T C A G T C G T A C C G A T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G