Information for 1-TGAGTTATAGCTACAA (Motif 1)

A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A T G C C G T A C G T A
Reverse Opposite:
A C G T A C G T A T C G A C G T C G T A A C T G A G T C A C G T G T C A A C G T C G T A C G T A G T A C C G A T A G T C G T C A
p-value:1e-17
log p-value:-4.054e+01
Information Content per bp:1.931
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.47%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.0 +/- 5.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGAGTTATAGCTACAA
TGATTTATGGCC----
 A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A T G C C G T A C G T A
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTTATAGCTACAA
NTGATTTATGGCC----
 A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A T G C C G T A C G T A
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGAGTTATAGCTACAA
TGATTTATGGCC----
 A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A T G C C G T A C G T A
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGAGTTATAGCTACAA
TGATTTATGGC-----
 A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A T G C C G T A C G T A
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T A C G T A C G T A C G T A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGAGTTATAGCTACAA-
---NNTATANATATACN
 A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A T G C C G T A C G T A A C G T
A C G T A C G T A C G T A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGAGTTATAGCTACAA
TGAGTGACAGSC----
 A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A T G C C G T A C G T A
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGAGTTATAGCTACAA
TGATTRATGGCY----
 A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A T G C C G T A C G T A
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTTATAGCTACAA
ATGAGTCAT--------
 A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A T G C C G T A C G T A
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGAGTTATAGCTACAA
TGAGTCATTTC-----
 A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A T G C C G T A C G T A
C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTTATAGCTACAA
NTGATTGACAGN-----
 A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G T A A T G C C G T A C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T A C G T