Information for 6-AAATAAACAG (Motif 9)

C G T A G T C A C T G A A G C T C T G A G T C A G T C A T A G C G T C A A C T G
Reverse Opposite:
T G A C A C G T A T C G A C G T A C G T A G C T C T G A A G C T C A G T A C G T
p-value:1e-13
log p-value:-3.019e+01
Information Content per bp:1.849
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.72%
Number of Background Sequences with motif345.2
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets46.0 +/- 27.4bp
Average Position of motif in Background49.8 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:AAATAAACAG
AAATAAACA-
 C G T A G T C A C T G A A G C T C T G A G T C A G T C A T A G C G T C A A C T G
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:2
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--AAATAAACAG
WWATRTAAACAN
 A C G T A C G T C G T A G T C A C T G A A G C T C T G A G T C A G T C A T A G C G T C A A C T G
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

FOXP2/MA0593.1/Jaspar

Match Rank:3
Score:0.80
Offset:0
Orientation:forward strand
Alignment:AAATAAACAG-
AAGTAAACAAA
 C G T A G T C A C T G A A G C T C T G A G T C A G T C A T A G C G T C A A C T G A C G T
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:4
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-AAATAAACAG-
WWTRTAAACAVG
 A C G T C G T A G T C A C T G A A G C T C T G A G T C A G T C A T A G C G T C A A C T G A C G T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Foxq1/MA0040.1/Jaspar

Match Rank:5
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:AAATAAACAG--
-AATAAACAATN
 C G T A G T C A C T G A A G C T C T G A G T C A G T C A T A G C G T C A A C T G A C G T A C G T
A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

FOXL1/MA0033.2/Jaspar

Match Rank:6
Score:0.79
Offset:2
Orientation:forward strand
Alignment:AAATAAACAG
--GTAAACA-
 C G T A G T C A C T G A A G C T C T G A G T C A G T C A T A G C G T C A A C T G
A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-AAATAAACAG
AAAGTAAACA-
 A C G T C G T A G T C A C T G A A G C T C T G A G T C A G T C A T A G C G T C A A C T G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AAATAAACAG
AAAGTAAACA-
 A C G T C G T A G T C A C T G A A G C T C T G A G T C A G T C A T A G C G T C A A C T G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AAATAAACAG--
AAACAAACATTC
 C G T A G T C A C T G A A G C T C T G A G T C A G T C A T A G C G T C A A C T G A C G T A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

FOXP3/MA0850.1/Jaspar

Match Rank:10
Score:0.76
Offset:2
Orientation:forward strand
Alignment:AAATAAACAG
--GTAAACA-
 C G T A G T C A C T G A A G C T C T G A G T C A G T C A T A G C G T C A A C T G
A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T