Information for 16-CGGTCTGTTCAGC (Motif 22)

A G T C A C T G A C T G A C G T A G T C A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C T G C G T A A G T C A G T C A C T G
p-value:1e-7
log p-value:-1.636e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.2 +/- 20.4bp
Average Position of motif in Background61.8 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGGTCTGTTCAGC
CTGTCTGG-----
 A G T C A C T G A C T G A C G T A G T C A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGGTCTGTTCAGC
VBSYGTCTGG-----
 A C G T A C G T A G T C A C T G A C T G A C G T A G T C A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:3
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CGGTCTGTTCAGC
VAGRACAKNCTGTBC---
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A G T C A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CGGTCTGTTCAGC
VAGRACAKWCTGTYC---
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A G T C A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CGGTCTGTTCAGC-----
-------GTCAGCANNTN
 A G T C A C T G A C T G A C G T A G T C A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.50
Offset:9
Orientation:forward strand
Alignment:CGGTCTGTTCAGC-
---------CAGCC
 A G T C A C T G A C T G A C G T A G T C A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CGGTCTGTTCAGC
GGNGCGNCTGTTNNN-
 A C G T A C G T A C G T A G T C A C T G A C T G A C G T A G T C A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CGGTCTGTTCAGC
----CTGTTTAC-
 A G T C A C T G A C T G A C G T A G T C A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CGGTCTGTTCAGC
--TKCTGTTCCA-
 A G T C A C T G A C T G A C G T A G T C A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CGGTCTGTTCAGC
AAGAACATWHTGTTC---
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A G T C A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T A C G T A C G T