Information for 2-CGCCCYCTGSTGG (Motif 2)

A G T C C T A G A T G C A G T C A G T C G A T C A T G C A G C T C T A G A T C G C G A T A C T G A C T G
Reverse Opposite:
G T A C A G T C G C T A T A G C A G T C C T G A T A C G C T A G T C A G A C T G A T C G G A T C T C A G
p-value:1e-31
log p-value:-7.224e+01
Information Content per bp:1.692
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.84%
Number of Background Sequences with motif186.2
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets46.2 +/- 26.4bp
Average Position of motif in Background49.0 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.94
Offset:-6
Orientation:forward strand
Alignment:------CGCCCYCTGSTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T A G A T G C A G T C A G T C G A T C A T G C A G C T C T A G A T C G C G A T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---CGCCCYCTGSTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G T C C T A G A T G C A G T C A G T C G A T C A T G C A G C T C T A G A T C G C G A T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.88
Offset:-4
Orientation:forward strand
Alignment:----CGCCCYCTGSTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G T C C T A G A T G C A G T C A G T C G A T C A T G C A G C T C T A G A T C G C G A T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCYCTGSTGG
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T A G T C C T A G A T G C A G T C A G T C G A T C A T G C A G C T C T A G A T C G C G A T A C T G A C T G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGCCCYCTGSTGG-
CACCCCCGGGGGGG
 A G T C C T A G A T G C A G T C A G T C G A T C A T G C A G C T C T A G A T C G C G A T A C T G A C T G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCCCYCTGSTGG--
GGCCYCCTGCTGDGH
 A G T C C T A G A T G C A G T C A G T C G A T C A T G C A G C T C T A G A T C G C G A T A C T G A C T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CGCCCYCTGSTGG
GCCMCGCCCMCY-----
 A C G T A C G T A C G T A C G T A G T C C T A G A T G C A G T C A G T C G A T C A T G C A G C T C T A G A T C G C G A T A C T G A C T G
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGCCCYCTGSTGG--
GACCCCCCGCTGTGC
 A G T C C T A G A T G C A G T C A G T C G A T C A T G C A G C T C T A G A T C G C G A T A C T G A C T G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGCCCYCTGSTGG--
CCCCCCCGGGGGGGT
 A G T C C T A G A T G C A G T C A G T C G A T C A T G C A G C T C T A G A T C G C G A T A C T G A C T G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

KLF14/MA0740.1/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCYCTGSTGG
GGCCACGCCCCCTT----
 A C G T A C G T A C G T A C G T A C G T A G T C C T A G A T G C A G T C A G T C G A T C A T G C A G C T C T A G A T C G C G A T A C T G A C T G
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T