Information for 12-TGYCAAGKSAKTT (Motif 18)

A C G T A C T G A G C T A G T C C G T A C T G A A C T G A C T G A T G C C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A G T A C A C G T A T C G G T A C G T A C A G C T A C G T A C T G T C G A A G T C C G T A
p-value:1e-10
log p-value:-2.393e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 20.7bp
Average Position of motif in Background47.6 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGYCAAGKSAKTT
GGTGCCAAGT-----
 A C G T A C G T A C G T A C T G A G C T A G T C C G T A C T G A A C T G A C T G A T G C C G T A A C T G A C G T A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGYCAAGKSAKTT
TTGCCAAG------
 A C G T A C G T A C T G A G C T A G T C C G T A C T G A A C T G A C T G A T G C C G T A A C T G A C G T A C G T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGYCAAGKSAKTT
CCTGTCAA-------
 A C G T A C G T A C G T A C T G A G C T A G T C C G T A C T G A A C T G A C T G A T G C C G T A A C T G A C G T A C G T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGYCAAGKSAKTT
CGTGCCAAG------
 A C G T A C G T A C G T A C T G A G C T A G T C C G T A C T G A A C T G A C T G A T G C C G T A A C T G A C G T A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGYCAAGKSAKTT
TGTCANYT-----
 A C G T A C T G A G C T A G T C C G T A C T G A A C T G A C T G A T G C C G T A A C T G A C G T A C G T
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGYCAAGKSAKTT
GCTGTCAA-------
 A C G T A C G T A C G T A C T G A G C T A G T C C G T A C T G A A C T G A C T G A T G C C G T A A C T G A C G T A C G T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGYCAAGKSAKTT
NTGTCAN-------
 A C G T A C G T A C T G A G C T A G T C C G T A C T G A A C T G A C T G A T G C C G T A A C T G A C G T A C G T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGYCAAGKSAKTT
RHTGWCAR-------
 A C G T A C G T A C G T A C T G A G C T A G T C C G T A C T G A A C T G A C T G A T G C C G T A A C T G A C G T A C G T
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGYCAAGKSAKTT
TGCCAA-------
 A C G T A C T G A G C T A G T C C G T A C T G A A C T G A C T G A T G C C G T A A C T G A C G T A C G T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGYCAAGKSAKTT-
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C T G A G C T A G T C C G T A C T G A A C T G A C T G A T G C C G T A A C T G A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A