Information for 9-CCAATCGGCG (Motif 15)

A G T C A G T C C G T A C T G A C G A T A G T C C T A G A C T G A G T C A T C G
Reverse Opposite:
A T G C T C A G G T A C A G T C T C A G G C T A A G C T A C G T A C T G C T A G
p-value:1e-10
log p-value:-2.481e+01
Information Content per bp:1.811
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif72.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets51.0 +/- 27.7bp
Average Position of motif in Background44.3 +/- 37.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CCAATCGGCG
AGCCAATCGG--
 A C G T A C G T A G T C A G T C C G T A C T G A C G A T A G T C C T A G A C T G A G T C A T C G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.79
Offset:-7
Orientation:forward strand
Alignment:-------CCAATCGGCG
AAATGGACCAATCAG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T G A C G A T A G T C C T A G A C T G A G T C A T C G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----CCAATCGGCG----
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T G A C G A T A G T C C T A G A C T G A G T C A T C G A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CCAATCGGCG
ACTAGCCAATCA---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T G A C G A T A G T C C T A G A C T G A G T C A T C G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

PH0089.1_Isx/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CCAATCGGCG--
ACNNCTAATTAGNNNN
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T G A C G A T A G T C C T A G A C T G A G T C A T C G A C G T A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

PH0109.1_Nkx1-1/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCAATCGGCG---
TGCGCTAATTAGTGGGA
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T G A C G A T A G T C C T A G A C T G A G T C A T C G A C G T A C G T A C G T
C G A T T A C G G T A C T C A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T C A T G T A C G A C T G T C G A

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCAATCGGCG
CCAATCAA--
 A G T C A G T C C G T A C T G A C G A T A G T C C T A G A C T G A G T C A T C G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCAATCGGCG
CAAATCACTG
 A G T C A G T C C G T A C T G A C G A T A G T C C T A G A C T G A G T C A T C G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCAATCGGCG
TGCCAA------
 A C G T A C G T A G T C A G T C C G T A C T G A C G A T A G T C C T A G A C T G A G T C A T C G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCAATCGGCG---
ACCCCTAATTAGCGGTG
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T G A C G A T A G T C C T A G A C T G A G T C A T C G A C G T A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G