Information for 5-TGRAAWDTTCCATTYC (Motif 12)

C G A T C T A G C T A G T C G A G T C A C G T A C G A T G C A T G A C T G T A C G T A C C G T A A G C T G C A T A G T C G T A C
Reverse Opposite:
A C T G T C A G C G T A T C G A G C A T A C T G C A T G C T G A C G T A G C T A C G A T A C G T A G C T G A T C A G T C G C T A
p-value:1e-11
log p-value:-2.609e+01
Information Content per bp:1.585
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif228.2
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets59.8 +/- 23.5bp
Average Position of motif in Background50.6 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGRAAWDTTCCATTYC
-GGAAATTCCC-----
 C G A T C T A G C T A G T C G A G T C A C G T A C G A T G C A T G A C T G T A C G T A C C G T A A G C T G C A T A G T C G T A C
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGRAAWDTTCCATTYC
-GGAAATCCCC-----
 C G A T C T A G C T A G T C G A G T C A C G T A C G A T G C A T G A C T G T A C G T A C C G T A A G C T G C A T A G T C G T A C
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGRAAWDTTCCATTYC
GGGAAATCCCCN----
 C G A T C T A G C T A G T C G A G T C A C G T A C G A T G C A T G A C T G T A C G T A C C G T A A G C T G C A T A G T C G T A C
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGRAAWDTTCCATTYC
-GGAAATTCCC-----
 C G A T C T A G C T A G T C G A G T C A C G T A C G A T G C A T G A C T G T A C G T A C C G T A A G C T G C A T A G T C G T A C
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGRAAWDTTCCATTYC
----ATTTTCCATT--
 C G A T C T A G C T A G T C G A G T C A C G T A C G A T G C A T G A C T G T A C G T A C C G T A A G C T G C A T A G T C G T A C
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGRAAWDTTCCATTYC
----ATTTTCCATT--
 C G A T C T A G C T A G T C G A G T C A C G T A C G A T G C A T G A C T G T A C G T A C C G T A A G C T G C A T A G T C G T A C
A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGRAAWDTTCCATTYC
----ATTTTCCATT--
 C G A T C T A G C T A G T C G A G T C A C G T A C G A T G C A T G A C T G T A C G T A C C G T A A G C T G C A T A G T C G T A C
A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGRAAWDTTCCATTYC
-GGAAANCCCC-----
 C G A T C T A G C T A G T C G A G T C A C G T A C G A T G C A T G A C T G T A C G T A C C G T A A G C T G C A T A G T C G T A C
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGRAAWDTTCCATTYC
----ATTTTCCATT--
 C G A T C T A G C T A G T C G A G T C A C G T A C G A T G C A T G A C T G T A C G T A C C G T A A G C T G C A T A G T C G T A C
A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGRAAWDTTCCATTYC
-----TTTTCCA----
 C G A T C T A G C T A G T C G A G T C A C G T A C G A T G C A T G A C T G T A C G T A C C G T A A G C T G C A T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T