p-value: | 1e-9 |
log p-value: | -2.161e+01 |
Information Content per bp: | 1.767 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 2.52% |
Number of Background Sequences with motif | 3.3 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 44.0 +/- 26.8bp |
Average Position of motif in Background | 45.3 +/- 37.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.50 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGACAGCAVGVTGCCG DCHCAGCAGGRGGCC- |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGACAGCAVGVTGCCG -CACAGCAGGGGG--- |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGACAGCAVGVTGCCG GAGCACAGCAGGACA--- |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGACAGCAVGVTGCCG DCTCAGCAGG------ |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGACAGCAVGVTGCCG CCACACAGCAGGAGA--- |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGACAGCAVGVTGCCG CCACACAGCAGGAGA--- |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGACAGCAVGVTGCCG -CACAGN--------- |
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NRL/MA0842.1/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGACAGCAVGVTGCCG -GTCAGCANNTN---- |
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RUNX2/MA0511.2/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGACAGCAVGVTGCCG AAACCGCAA------- |
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MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer
Match Rank: | 10 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGACAGCAVGVTGCCG TGAGTCAGCA-------- |
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