Information for 21-AGGATCCCGA (Motif 40)

C G T A A C T G A C T G C G T A A C G T A G T C A G T C A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C T G A C T G C G T A A C G T A G T C A G T C A C G T
p-value:1e-2
log p-value:-5.005e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 27.8bp
Average Position of motif in Background64.0 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGGATCCCGA--
--GAGSCCGAGC
 C G T A A C T G A C T G C G T A A C G T A G T C A G T C A G T C A C T G C G T A A C G T A C G T
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

PB0077.1_Spdef_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGGATCCCGA-----
AANNATCCGGATGTNN
 A C G T C G T A A C T G A C T G C G T A A C G T A G T C A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGGATCCCGA
ANCAGGATGT---
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A G T C A G T C A G T C A C T G C G T A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGATCCCGA
ATAATCCC--
 C G T A A C T G A C T G C G T A A C G T A G T C A G T C A G T C A C T G C G T A
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGGATCCCGA--------
GAAGTANCACGAATNMRAGT
 A C G T A C G T C G T A A C T G A C T G C G T A A C G T A G T C A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGATCCCGA
AAGACCCYYN
 C G T A A C T G A C T G C G T A A C G T A G T C A G T C A G T C A C T G C G T A
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGGATCCCGA--
--GGTCCCGCCC
 C G T A A C T G A C T G C G T A A C G T A G T C A G T C A G T C A C T G C G T A A C G T A C G T
A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGGATCCCGA---
BCNGGTTCTAGANCN
 A C G T A C G T C G T A A C T G A C T G C G T A A C G T A G T C A G T C A G T C A C T G C G T A A C G T A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGGATCCCGA
----TCCCCA
 C G T A A C T G A C T G C G T A A C G T A G T C A G T C A G T C A C T G C G T A
A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

PB0162.1_Sfpi1_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGATCCCGA-----
-GGTTCCNNAATTTG
 C G T A A C T G A C T G C G T A A C G T A G T C A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G