Information for 7-CCAGCCGGTT (Motif 23)

A G T C A G T C C G T A A T C G A G T C A G T C A C T G A T C G A G C T A C G T
Reverse Opposite:
C G T A C T G A A T G C A G T C A C T G A C T G A T G C A C G T A C T G A C T G
p-value:1e-5
log p-value:-1.278e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif3.14%
Number of Background Sequences with motif63.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets57.9 +/- 25.1bp
Average Position of motif in Background44.9 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFCP2/MA0145.3/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCAGCCGGTT-
-AAACCGGTTT
 A G T C A G T C C G T A A T C G A G T C A G T C A C T G A T C G A G C T A C G T A C G T
A C G T C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCAGCCGGTT
CCAGCTGTTN
 A G T C A G T C C G T A A T C G A G T C A G T C A C T G A T C G A G C T A C G T
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

SPDEF/MA0686.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCCGGTT
TACATCCGGGT
 A C G T A G T C A G T C C G T A A T C G A G T C A G T C A C T G A T C G A G C T A C G T
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCAGCCGGTT
HCAGCTGDTN
 A G T C A G T C C G T A A T C G A G T C A G T C A C T G A T C G A G C T A C G T
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

GRHL1/MA0647.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCAGCCGGTT--
NAAACCGGTTTT
 A G T C A G T C C G T A A T C G A G T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCAGCCGGTT
NCAGCTGCTG
 A G T C A G T C C G T A A T C G A G T C A G T C A C T G A T C G A G C T A C G T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCCGGTT-
GCCAGCTGBTNB
 A C G T A G T C A G T C C G T A A T C G A G T C A G T C A C T G A T C G A G C T A C G T A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCAGCCGGTT
-CAGCTGNT-
 A G T C A G T C C G T A A T C G A G T C A G T C A C T G A T C G A G C T A C G T
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCAGCCGGTT
CCAGACAG--
 A G T C A G T C C G T A A T C G A G T C A G T C A C T G A T C G A G C T A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCAGCCGGTT
GCCATCTGTT-
 A C G T A G T C A G T C C G T A A T C G A G T C A G T C A C T G A T C G A G C T A C G T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T