Information for 9-TTYMCMSWRATGTYAA (Motif 12)

A C G T A C G T A G C T G T A C A G T C G T A C A T C G C G T A C T A G C G T A A C G T A C T G A C G T A G C T C G T A C G T A
Reverse Opposite:
A C G T A C G T C T G A C G T A A G T C C G T A A C G T A G T C C G A T A T G C A C T G A C T G C A G T C T G A C G T A G T C A
p-value:1e-8
log p-value:-1.890e+01
Information Content per bp:1.824
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.8 +/- 26.3bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TTYMCMSWRATGTYAA
-------AAAAGTCAA
 A C G T A C G T A G C T G T A C A G T C G T A C A T C G C G T A C T A G C G T A A C G T A C T G A C G T A G C T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.58
Offset:8
Orientation:forward strand
Alignment:TTYMCMSWRATGTYAA----
--------TATGCWAATBAV
 A C G T A C G T A G C T G T A C A G T C G T A C A T C G C G T A C T A G C G T A A C G T A C T G A C G T A G C T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TTYMCMSWRATGTYAA-
-------AGGTGTTAAT
 A C G T A C G T A G C T G T A C A G T C G T A C A T C G C G T A C T A G C G T A A C G T A C T G A C G T A G C T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TTYMCMSWRATGTYAA
--------RHTGWCAR
 A C G T A C G T A G C T G T A C A G T C G T A C A T C G C G T A C T A G C G T A A C G T A C T G A C G T A G C T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TTYMCMSWRATGTYAA
--------CCTGTCAA
 A C G T A C G T A G C T G T A C A G T C G T A C A T C G C G T A C T A G C G T A A C G T A C T G A C G T A G C T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:TTYMCMSWRATGTYAA
---------NTGTCAN
 A C G T A C G T A G C T G T A C A G T C G T A C A T C G C G T A C T A G C G T A A C G T A C T G A C G T A G C T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TTYMCMSWRATGTYAA
----TCCAGATGTT--
 A C G T A C G T A G C T G T A C A G T C G T A C A T C G C G T A C T A G C G T A A C G T A C T G A C G T A G C T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TTYMCMSWRATGTYAA---
-------TTATGCAAATTA
 A C G T A C G T A G C T G T A C A G T C G T A C A T C G C G T A C T A G C G T A A C G T A C T G A C G T A G C T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TTYMCMSWRATGTYAA
--------GCTGTCAA
 A C G T A C G T A G C T G T A C A G T C G T A C A T C G C G T A C T A G C G T A A C G T A C T G A C G T A G C T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTYMCMSWRATGTYAA----
---NNNCAGCTGTCAATATN
 A C G T A C G T A G C T G T A C A G T C G T A C A T C G C G T A C T A G C G T A A C G T A C T G A C G T A G C T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C