Information for 4-TGCCTKTATTTCT (Motif 22)

C G A T A C T G A G T C A G T C A C G T A C T G A C G T C T G A A C G T A C G T A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A T C G A C G T A A G C T G T C A T G A C C G T A A C T G C T A G A G T C C G T A
p-value:1e-7
log p-value:-1.735e+01
Information Content per bp:1.835
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif53.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets41.6 +/- 31.2bp
Average Position of motif in Background46.6 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGCCTKTATTTCT
--CCTTTGTTTT-
 C G A T A C T G A G T C A G T C A C G T A C T G A C G T C T G A A C G T A C G T A C G T A G T C A G C T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTKTATTTCT--
ANTCCTTTGTCTNNNN
 A C G T C G A T A C T G A G T C A G T C A C G T A C T G A C G T C T G A A C G T A C G T A C G T A G T C A G C T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGCCTKTATTTCT
--CCTTTGTT---
 C G A T A C T G A G T C A G T C A C G T A C T G A C G T C T G A A C G T A C G T A C G T A G T C A G C T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGCCTKTATTTCT
NNACTTGCCTT-------
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A G T C A G T C A C G T A C T G A C G T C T G A A C G T A C G T A C G T A G T C A G C T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGCCTKTATTTCT
--YCTTTGTTCC-
 C G A T A C T G A G T C A G T C A C G T A C T G A C G T C T G A A C G T A C G T A C G T A G T C A G C T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TGCCTKTATTTCT-
---TTTTATGGCTN
 C G A T A C T G A G T C A G T C A C G T A C T G A C G T C T G A A C G T A C G T A C G T A G T C A G C T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCCTKTATTTCT--
TGCCTGCGYCMCCTT
 C G A T A C T G A G T C A G T C A C G T A C T G A C G T C T G A A C G T A C G T A C G T A G T C A G C T A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGCCTKTATTTCT
--CCATTGTTTT-
 C G A T A C T G A G T C A G T C A C G T A C T G A C G T C T G A A C G T A C G T A C G T A G T C A G C T
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGCCTKTATTTCT
CTGCCCGCA-----
 A C G T C G A T A C T G A G T C A G T C A C G T A C T G A C G T C T G A A C G T A C G T A C G T A G T C A G C T
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGCCTKTATTTCT
--CCWTTGTY---
 C G A T A C T G A G T C A G T C A C G T A C T G A C G T C T G A A C G T A C G T A C G T A G T C A G C T
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T