Information for 12-GCCACCTGCCCGSCAM (Motif 12)

C T A G A G T C A G T C G T C A T A G C A G T C A C G T A C T G A G T C T A G C A G T C C T A G A T G C A G T C C G T A G T A C
Reverse Opposite:
A C T G A C G T A C T G A T C G A G T C C T A G A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C
p-value:1e-9
log p-value:-2.137e+01
Information Content per bp:1.812
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 30.6bp
Average Position of motif in Background75.4 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCCACCTGCCCGSCAM
SNGCACCTGCHS-----
 A C G T C T A G A G T C A G T C G T C A T A G C A G T C A C G T A C T G A G T C T A G C A G T C C T A G A T G C A G T C C G T A G T A C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCACCTGCCCGSCAM
NNCACCTGNN------
 C T A G A G T C A G T C G T C A T A G C A G T C A C G T A C T G A G T C T A G C A G T C C T A G A T G C A G T C C G T A G T A C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCACCTGCCCGSCAM
GCCATCTGTT------
 C T A G A G T C A G T C G T C A T A G C A G T C A C G T A C T G A G T C T A G C A G T C C T A G A T G C A G T C C G T A G T A C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCACCTGCCCGSCAM
NNVCAGCTGB-------
 A C G T C T A G A G T C A G T C G T C A T A G C A G T C A C G T A C T G A G T C T A G C A G T C C T A G A T G C A G T C C G T A G T A C
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCACCTGCCCGSCAM-----
-VCAKCTGGNNNCCAGMTGBN
 C T A G A G T C A G T C G T C A T A G C A G T C A C G T A C T G A G T C T A G C A G T C C T A G A T G C A G T C C G T A G T A C A C G T A C G T A C G T A C G T A C G T
A C G T T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCACCTGCCCGSCAM
NNACAGCTGC-------
 A C G T C T A G A G T C A G T C G T C A T A G C A G T C A C G T A C T G A G T C T A G C A G T C C T A G A T G C A G T C C G T A G T A C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCCACCTGCCCGSCAM
NVCAGCTGBBNN----
 C T A G A G T C A G T C G T C A T A G C A G T C A C G T A C T G A G T C T A G C A G T C C T A G A T G C A G T C C G T A G T A C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCACCTGCCCGSCAM
AACACCTGCT------
 C T A G A G T C A G T C G T C A T A G C A G T C A C G T A C T G A G T C T A G C A G T C C T A G A T G C A G T C C G T A G T A C
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCACCTGCCCGSCAM
GCCAGCTGBTNB----
 C T A G A G T C A G T C G T C A T A G C A G T C A C G T A C T G A G T C T A G C A G T C C T A G A T G C A G T C C G T A G T A C
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCACCTGCCCGSCAM
CGACCAACTGCCGTG---
 A C G T A C G T C T A G A G T C A G T C G T C A T A G C A G T C A C G T A C T G A G T C T A G C A G T C C T A G A T G C A G T C C G T A G T A C
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T A C G T A C G T