Information for 3-CCTCTGTATT (Motif 8)

A G T C A G T C G A C T G T A C A C G T A C T G A G C T G T C A C G A T C G A T
Reverse Opposite:
C G T A C G T A C A G T C T G A G T A C C G T A A C T G C G T A A C T G A C T G
p-value:1e-9
log p-value:-2.262e+01
Information Content per bp:1.849
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif93.7
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets50.5 +/- 32.3bp
Average Position of motif in Background50.0 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTCTGTATT
CCTTTGTTTT
 A G T C A G T C G A C T G T A C A C G T A C T G A G C T G T C A C G A T C G A T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTCTGTATT
CCTTTGTT--
 A G T C A G T C G A C T G T A C A C G T A C T G A G C T G T C A C G A T C G A T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCTCTGTATT
AGGVNCCTTTGT---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G A C T G T A C A C G T A C T G A G C T G T C A C G A T C G A T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTCTGTATT
CCATTGTTTT
 A G T C A G T C G A C T G T A C A C G T A C T G A G C T G T C A C G A T C G A T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCTCTGTATT
-CTTTGT---
 A G T C A G T C G A C T G T A C A C G T A C T G A G C T G T C A C G A T C G A T
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCTCTGTATT---
--TGTGGATTNNN
 A G T C A G T C G A C T G T A C A C G T A C T G A G C T G T C A C G A T C G A T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGTATT---
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A G T C A G T C G A C T G T A C A C G T A C T G A G C T G T C A C G A T C G A T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTGTATT
NAACATCTGGATN
 A C G T A C G T A C G T A G T C A G T C G A C T G T A C A C G T A C T G A G C T G T C A C G A T C G A T
T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCTCTGTATT---
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A G T C A G T C G A C T G T A C A C G T A C T G A G C T G T C A C G A T C G A T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCTCTGTATT---
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A G T C A G T C G A C T G T A C A C G T A C T G A G C T G T C A C G A T C G A T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T