Information for 2-CCGCGCCGAGACC (Motif 4)

A G T C A T G C A C T G A T G C A C T G A G T C A G T C A T C G C G T A A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C A C G T A T G C C T A G A C T G A G T C A T C G A G T C A T C G A C T G
p-value:1e-10
log p-value:-2.519e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 25.0bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCGCGCCGAGACC
AGCGCGCC------
 A C G T A G T C A T G C A C T G A T G C A C T G A G T C A G T C A T C G C G T A A C T G C G T A A G T C A G T C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCGCGCCGAGACC--
-GGGGCCGAGGCCTG
 A G T C A T G C A C T G A T G C A C T G A G T C A G T C A T C G C G T A A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCGCGCCGAGACC
GCCGCGCAGTGCGT
 A C G T A G T C A T G C A C T G A T G C A C T G A G T C A G T C A T C G C G T A A C T G C G T A A G T C A G T C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCGCGCCGAGACC
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A G T C A T G C A C T G A T G C A C T G A G T C A G T C A T C G C G T A A C T G C G T A A G T C A G T C
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0036.1_Irf6_1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCGCGCCGAGACC-----
-CTGATCGAAACCAAAGT
 A G T C A T G C A C T G A T G C A C T G A G T C A G T C A T C G C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCGCGCCGAGACC-----
--NNGGCGACACCTCNNN
 A G T C A T G C A C T G A T G C A C T G A G T C A G T C A T C G C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCGCGCCGAGACC
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A G T C A T G C A C T G A T G C A C T G A G T C A G T C A T C G C G T A A C T G C G T A A G T C A G T C
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCGCGCCGAGACC-
------CCAGACAG
 A G T C A T G C A C T G A T G C A C T G A G T C A G T C A T C G C G T A A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCGCGCCGAGACC-
TCCCAGMCRAGCCCC
 A C G T A G T C A T G C A C T G A T G C A C T G A G T C A G T C A T C G C G T A A C T G C G T A A G T C A G T C A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Spz1/MA0111.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CCGCGCCGAGACC--
----GCTGTTACCCT
 A G T C A T G C A C T G A T G C A C T G A G T C A G T C A T C G C G T A A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T