Information for 8-TGCGTGTTCC (Motif 19)

A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G C T A G T C A T G C
Reverse Opposite:
A T C G A C T G C T G A C G T A A G T C C G T A A G T C A C T G A G T C C G T A
p-value:1e-5
log p-value:-1.312e+01
Information Content per bp:1.944
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 29.4bp
Average Position of motif in Background35.9 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TGCGTGTTCC
TGCGTG----
 A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G C T A G T C A T G C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGCGTGTTCC
CGTGGGTGGTCC
 A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G C T A G T C A T G C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGCGTGTTCC
TTGCGTGCVA-
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G C T A G T C A T G C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TGCGTGTTCC---
---CTGTTCCTGG
 A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G C T A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGTGTTCC-
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G C T A G T C A T G C A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGCGTGTTCC
CATGCGGGTAC-
 A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G C T A G T C A T G C
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T

GCM2/MA0767.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGCGTGTTCC
TATGCGGGTA--
 A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G C T A G T C A T G C
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCGTGTTCC-
TGCGTGGGCGT
 A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G C T A G T C A T G C A C G T
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

EGR3/MA0732.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCGTGTTCC---
ANTGCGTGGGCGTNN
 A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G C T A G T C A T G C A C G T A C G T A C G T
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGCGTGTTCC-
CAGTGTGGTCGC
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G C T A G T C A T G C A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C