Information for 7-CCTTGAVGATGCC (Motif 17)

T A G C A G T C A G C T A C G T A T C G T C G A T G C A T A C G T G C A A G C T T A C G G A T C A G T C
Reverse Opposite:
C T A G C A T G A T G C T C G A A C G T A T G C A C G T A G C T T A G C G T C A C T G A C T A G A T C G
p-value:1e-7
log p-value:-1.679e+01
Information Content per bp:1.639
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.22%
Number of Background Sequences with motif715.3
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets45.9 +/- 22.5bp
Average Position of motif in Background50.8 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGAVGATGCC
TGACCTTGAN------
 A C G T A C G T A C G T T A G C A G T C A G C T A C G T A T C G T C G A T G C A T A C G T G C A A G C T T A C G G A T C A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGAVGATGCC
TGACCTTGAV------
 A C G T A C G T A C G T T A G C A G T C A G C T A C G T A T C G T C G A T G C A T A C G T G C A A G C T T A C G G A T C A G T C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGAVGATGCC
GCTGACCTTGAACTN---
 A C G T A C G T A C G T A C G T A C G T T A G C A G T C A G C T A C G T A T C G T C G A T G C A T A C G T G C A A G C T T A C G G A T C A G T C
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGAVGATGCC
TGACCTTGACCT----
 A C G T A C G T A C G T T A G C A G T C A G C T A C G T A T C G T C G A T G C A T A C G T G C A A G C T T A C G G A T C A G T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCTTGAVGATGCC
ATGACCTTGAA------
 A C G T A C G T A C G T A C G T T A G C A G T C A G C T A C G T A T C G T C G A T G C A T A C G T G C A A G C T T A C G G A T C A G T C
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGAVGATGCC
TGACCTTGACCT----
 A C G T A C G T A C G T T A G C A G T C A G C T A C G T A T C G T C G A T G C A T A C G T G C A A G C T T A C G G A T C A G T C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGAVGATGCC
BNTGDCCTTG--------
 A C G T A C G T A C G T A C G T A C G T T A G C A G T C A G C T A C G T A T C G T C G A T G C A T A C G T G C A A G C T T A C G G A T C A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.54
Offset:-8
Orientation:reverse strand
Alignment:--------CCTTGAVGATGCC
NNNNATGACCTTGANTN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C A G C T A C G T A T C G T C G A T G C A T A C G T G C A A G C T T A C G G A T C A G T C
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGAVGATGCC
NATGACCTTGA-------
 A C G T A C G T A C G T A C G T A C G T T A G C A G T C A G C T A C G T A T C G T C G A T G C A T A C G T G C A A G C T T A C G G A T C A G T C
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCTTGAVGATGCC------
TTCTAGAANNTTCCAGAANN
 A C G T T A G C A G T C A G C T A C G T A T C G T C G A T G C A T A C G T G C A A G C T T A C G G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G